Factsheet for PGSC0003DMT400035255

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 4
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc07g042590.2.1	Tomato	cytosol	97.29	97.29
PGSC0003DMT400007503	Potato	cytosol	68.55	80.8
KRH60107	Soybean	cytosol	63.35	73.88
KRH41391	Soybean	cytosol	63.12	73.61
VIT_11s0065g00470.t01	Wine grape	cytosol	70.81	68.64
GSMUA_Achr7P19720_001	Banana	cytosol	52.49	67.64
GSMUA_Achr10P...	Banana	cytosol	50.91	67.16
CDX86877	Canola	plastid	62.9	63.91
CDY66556	Canola	plastid	63.35	63.64
CDY68998	Canola	cytosol	33.48	63.25
AT2G07180.1	Thale cress	cytosol	62.9	62.9
CDX94273	Canola	cytosol	62.67	62.25
CDY41127	Canola	cytosol	62.44	62.02
Bra037903.1-P	Field mustard	plastid	63.12	61.18
Bra033198.1-P	Field mustard	cytosol	61.54	61.12
Os06t0663200-01	Rice	cytosol, plasma membrane	59.95	56.5
KXG20556	Sorghum	cytosol	59.05	56.01
Zm00001d046939_P001	Maize	cytosol	59.05	55.89
TraesCS7D01G474600.1	Wheat	cytosol	59.73	55.35
TraesCS7B01G391200.1	Wheat	cytosol	59.73	55.35
GSMUA_Achr4P09620_001	Banana	cytosol	52.94	55.19
TraesCS7A01G487900.1	Wheat	cytosol	59.73	55.11
KXG20794	Sorghum	plastid	47.29	54.71
TraesCS7A01G416100.1	Wheat	mitochondrion	47.06	54.45
TraesCS7D01G409400.1	Wheat	cytosol	46.83	54.19
PGSC0003DMT400061697	Potato	cytosol, plastid	47.29	54.15
TraesCS7B01G316100.1	Wheat	cytosol	47.06	53.89
GSMUA_Achr7P04920_001	Banana	cytosol	54.52	53.79
PGSC0003DMT400071214	Potato	cytosol	49.77	51.64
HORVU7Hr1G109590.5	Barley	plasma membrane	59.73	50.87
Os06t0703000-01	Rice	plasma membrane	46.15	50.75
PGSC0003DMT400005987	Potato	plastid	47.06	50.49
HORVU7Hr1G096400.1	Barley	peroxisome, plastid	41.4	50.14
Zm00001d036656_P003	Maize	cytosol	55.66	50.1
PGSC0003DMT400011147	Potato	mitochondrion, plasma membrane, plastid, vacuole	46.38	48.35
PGSC0003DMT400040626	Potato	plastid	44.8	47.03
PGSC0003DMT400071701	Potato	cytosol	45.48	45.79
PGSC0003DMT400033828	Potato	cytosol	44.34	45.27
PGSC0003DMT400012413	Potato	cytosol	45.93	43.75
Zm00001d036459_P005	Maize	mitochondrion, plastid	35.97	40.25
Zm00001d014697_P002	Maize	mitochondrion	36.88	39.95
GSMUA_Achr3P27770_001	Banana	cytosol	54.75	29.33

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:102584422	MapMan:18.4.1.37.1	Gene3D:3.30.200.20	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464
GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740
GO:GO:0019538	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	UniProt:M1B212	PFAM:PF07714	EnsemblPlantsGene:PGSC0003DMG400013545
PGSC:PGSC0003DMG400013545	EnsemblPlants:PGSC0003DMT400035255	PIRSF:PIRSF000615	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011
PANTHER:PTHR27001	PANTHER:PTHR27001:SF190	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom
InterPro:Ser/Thr_kinase_AS	UniParc:UPI000295774A	RefSeq:XP_006353761.1	:	:	:

Description

Protein kinase APK1B, chloroplast [Source:PGSC_GENE;Acc:PGSC0003DMG400013545]

Coordinates

chr7:-:40685634..40691317

Molecular Weight (calculated)

49040.5 Da

IEP (calculated)

7.161

GRAVY (calculated)

-0.425

Length

442 amino acids

Sequence
(BLAST)

001: MGSCFSIEED ETEPRPHNKP VGHGVGAYPR SNPVIPQNTN LNSHDTEKAN SIVVIPKNVK DLRQNPGSSD LDIFTYEEMK LSTKHFRPDK VLGEGGFGIV
101: YKGVIDENVR PGYKTTYVAI KELDPESLQG DREWLAEVNY LGHIRHPNLV KLIGYCCEDY HRLLVYEYMA SGSLETHLFP RVCATLSWSR RMRIALDAAK
201: GLAFLHGAER PIIYRDFKTS NILLDAEFNA KLSDFGLAKD GPMGDQTHVS TRVMGTYGYA APEYVMTGHL TARSDVYGFG VVLLEMLIGR RAMDKSKPSR
301: EHNLVEFARP LLNHGKKLFR IIDPRLDGQY SSKTALKVAN LAYQCLSQNP KGRPVMSVVV EILEALQPQD KGEEALLMTG GGSVTLYEAK ANPLKCESGR
401: EADASKSNQT NGRSKSELPK ECDLYSPSPD LVLDVGSVSS RS

Best Arabidopsis Sequence Match ( AT2G07180.2 )
(BLAST)

001: MGICFSAEDQ HYQFSQQQNY PKKTTPGKKA AVYLMKSDCE DVVGKVSGSG SGGGGLPLAP KNIKDLQSNP GYENVDIFTY EEMKIATKQF RPDYILGEGG
101: FGVVYKGVID ESVRVGFKST KVAIKELNPE GFQGDREWLA EVNYLGQLSH PNLVKLIGYC CEDDHRLLVY EYMAMGSLEK HLFRRVGCTL TWTKRMKIAL
201: DAAKGLAFLH GAERSIIYRD LKTANILLDE GYNAKLSDFG LAKDGPRGDQ THVSTRVMGT YGYAAPEYVM TGHLTSRSDV YGFGVLLLEM LLGKRAMDKS
301: RACREHNLVE WARPLLNHNK KLLRIIDPRM DGQYGTKALM KVAGLAYQCL SQNPKGRPLM NHVVEVLETL KDDGDAQEEV MTNLHSRGKS VTLYEASSDS
401: QGTRDGNGQR RRRPESGRSK SEAAVDTEKY VSTLSEPDTT KI

Arabidopsis Description

PBL17Probable serine/threonine-protein kinase PBL17 [Source:UniProtKB/Swiss-Prot;Acc:Q8H1E3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.