Factsheet for Solyc12g009310.1.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400007503	Potato	cytosol	98.13	98.13
KRH60107	Soybean	cytosol	69.6	68.87
KRH41391	Soybean	cytosol	69.33	68.6
Solyc07g042590.2.1	Tomato	cytosol	80.0	67.87
GSMUA_Achr10P...	Banana	cytosol	56.0	62.69
GSMUA_Achr7P19720_001	Banana	cytosol	56.0	61.22
VIT_11s0065g00470.t01	Wine grape	cytosol	70.93	58.33
CDX86877	Canola	plastid	65.87	56.78
CDY66556	Canola	plastid	66.4	56.59
AT2G07180.1	Thale cress	cytosol	66.13	56.11
CDX94273	Canola	cytosol	65.6	55.28
CDY41127	Canola	cytosol	65.33	55.06
Bra037903.1-P	Field mustard	plastid	66.13	54.39
Bra033198.1-P	Field mustard	cytosol	64.27	54.16
KXG20794	Sorghum	plastid	53.87	52.88
GSMUA_Achr4P09620_001	Banana	cytosol	59.47	52.59
Solyc01g028830.2.1	Tomato	plastid	53.6	52.07
TraesCS7A01G416100.1	Wheat	mitochondrion	52.27	51.31
CDY68998	Canola	cytosol	32.0	51.28
KXG20556	Sorghum	cytosol	63.47	51.07
TraesCS7B01G316100.1	Wheat	cytosol	52.53	51.04
Zm00001d046939_P001	Maize	cytosol	63.2	50.75
Os06t0663200-01	Rice	cytosol, plasma membrane	63.47	50.75
TraesCS7D01G409400.1	Wheat	cytosol	51.47	50.52
Solyc10g074710.1.1	Tomato	plastid	57.07	50.23
Solyc05g025820.2.1	Tomato	cytosol	54.13	49.75
TraesCS7D01G474600.1	Wheat	cytosol	62.93	49.48
TraesCS7B01G391200.1	Wheat	cytosol	62.93	49.48
GSMUA_Achr7P04920_001	Banana	cytosol	58.67	49.11
TraesCS7A01G487900.1	Wheat	cytosol	62.67	49.06
Os06t0703000-01	Rice	plasma membrane	52.27	48.76
HORVU7Hr1G096400.1	Barley	peroxisome, plastid	46.67	47.95
Solyc12g049360.1.1	Tomato	vacuole	53.33	47.73
Solyc08g074980.2.1	Tomato	plastid	53.07	47.16
Solyc07g041940.2.1	Tomato	cytosol, plastid	53.33	46.08
HORVU7Hr1G109590.5	Barley	plasma membrane	63.2	45.66
Zm00001d036656_P003	Maize	cytosol	59.73	45.62
Solyc08g061250.2.1	Tomato	cytosol	50.13	43.02
Solyc06g062920.2.1	Tomato	plastid	51.73	41.81
Zm00001d036459_P005	Maize	mitochondrion, plastid	42.13	40.0
Zm00001d014697_P002	Maize	mitochondrion	41.6	38.24
GSMUA_Achr3P27770_001	Banana	cytosol	57.87	26.3

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.37.1	Gene3D:3.30.200.20	ncoils:Coil	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0004675	GO:GO:0004871	GO:GO:0005488
GO:GO:0005524	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0006464	GO:GO:0006468
GO:GO:0007154	GO:GO:0007165	GO:GO:0007166	GO:GO:0007178	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016020	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	GO:GO:0038023
InterPro:IPR000719	UniProt:K4DC19	InterPro:Kinase-like_dom_sf	PFAM:PF07714	PIRSF:PIRSF000654	ScanProsite:PS00107
ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27001	PANTHER:PTHR27001:SF190	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS
SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	EnsemblPlantsGene:Solyc12g009310.1	EnsemblPlants:Solyc12g009310.1.1	UniParc:UPI000276983F

Description

No Description!

Coordinates

chr12:-:2586788..2590404

Molecular Weight (calculated)

42161.0 Da

IEP (calculated)

9.112

GRAVY (calculated)

-0.412

Length

375 amino acids

Sequence
(BLAST)

001: MGSCQSVEVG KTGQRPESKT VVHGVGSYPT KRNPVSQPKL KTPEGHDSRR RSSIVVIPET VEDLQQNPGI SDLDIFKYEE MKMATKHFRP KQVLGEGGFG
101: IVYKGVIDEH VRPGYKTTYV AIKELDPEGL QGDREWLAEM NYLGQLRHPN LVKLIGYCCE DHHRLLVYEY MESGSLEKHL FPRMCATLTW SRRMKVALDA
201: AKGLAFLHGA EMPVIYRDFK TSNILLDADF NAKLSDFGLA KDGPMGDQTH VSTRVMGTYG YAAPEYVMTG HLTARSDVYA YGVVLLEMLI GRRAIDKTRP
301: SQEYNLVEWA RPLLNHNKKL FKILDPRLKG QYSSKTVAKV ASLAYQCLSQ NPKGRPVMSQ VVEILEALQV PQGKD

Best Arabidopsis Sequence Match ( AT2G07180.2 )
(BLAST)

001: MGICFSAEDQ HYQFSQQQNY PKKTTPGKKA AVYLMKSDCE DVVGKVSGSG SGGGGLPLAP KNIKDLQSNP GYENVDIFTY EEMKIATKQF RPDYILGEGG
101: FGVVYKGVID ESVRVGFKST KVAIKELNPE GFQGDREWLA EVNYLGQLSH PNLVKLIGYC CEDDHRLLVY EYMAMGSLEK HLFRRVGCTL TWTKRMKIAL
201: DAAKGLAFLH GAERSIIYRD LKTANILLDE GYNAKLSDFG LAKDGPRGDQ THVSTRVMGT YGYAAPEYVM TGHLTSRSDV YGFGVLLLEM LLGKRAMDKS
301: RACREHNLVE WARPLLNHNK KLLRIIDPRM DGQYGTKALM KVAGLAYQCL SQNPKGRPLM NHVVEVLETL KDDGDAQEEV MTNLHSRGKS VTLYEASSDS
401: QGTRDGNGQR RRRPESGRSK SEAAVDTEKY VSTLSEPDTT KI

Arabidopsis Description

PBL17Probable serine/threonine-protein kinase PBL17 [Source:UniProtKB/Swiss-Prot;Acc:Q8H1E3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.