Factsheet for VIT_06s0004g00220.t01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid

Predictor Summary:

plastid 3
cytosol 2
mitochondrion 4
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc01g028830.2.1	Tomato	plastid	84.47	83.16
GSMUA_Achr8P26730_001	Banana	cytosol	72.37	83.08
PGSC0003DMT400061697	Potato	cytosol, plastid	84.21	82.9
GSMUA_Achr1P26800_001	Banana	mitochondrion	71.32	82.37
KRH43007	Soybean	cytosol	81.32	81.1
GSMUA_Achr6P22050_001	Banana	plastid	73.95	80.06
KRH59124	Soybean	cytosol, mitochondrion	80.26	79.84
GSMUA_Achr3P14980_001	Banana	cytosol	24.74	75.81
AT5G56460.1	Thale cress	cytosol	81.32	75.74
Os03t0159100-01	Rice	plasma membrane	74.74	75.53
Bra002815.1-P	Field mustard	endoplasmic reticulum, plasma membrane	48.16	75.31
EER95470	Sorghum	plastid	74.21	74.8
CDY41811	Canola	cytosol	80.0	73.25
Zm00001d027734_P004	Maize	cytosol, plastid	74.47	73.13
TraesCS4D01G273600.1	Wheat	plastid	75.0	73.08
CDY20721	Canola	cytosol	79.74	73.01
TraesCS1A01G138100.1	Wheat	plastid	70.0	72.88
TraesCS4B01G275000.1	Wheat	plastid	74.74	72.82
Bra035622.1-P	Field mustard	cytosol	77.89	72.55
TraesCS1D01G134500.1	Wheat	plastid	69.47	72.33
CDY47750	Canola	cytosol	79.74	72.14
CDY32778	Canola	cytosol	79.74	71.97
HORVU4Hr1G073020.2	Barley	plastid	73.95	71.68
Os10t0431900-01	Rice	plasma membrane	70.0	70.0
Zm00001d032902_P001	Maize	plastid	67.89	67.36
EER91583	Sorghum	plastid	66.84	66.32
GSMUA_Achr3P15000_001	Banana	cytosol	40.79	65.96
GSMUA_Achr7P27200_001	Banana	cytosol, plastid	68.42	65.49
TraesCS4A01G031000.1	Wheat	plastid	74.74	63.11
VIT_08s0056g00150.t01	Wine grape	cytosol	59.47	52.31
VIT_17s0000g05890.t01	Wine grape	cytosol	40.53	50.49
VIT_04s0008g02070.t01	Wine grape	cytosol	55.79	48.18
VIT_11s0016g01060.t01	Wine grape	mitochondrion, plastid	55.79	47.96
VIT_02s0087g00270.t01	Wine grape	plastid	53.42	47.88
VIT_09s0002g01110.t01	Wine grape	mitochondrion	52.11	45.0
VIT_11s0065g00470.t01	Wine grape	cytosol	53.95	44.96
TraesCS1B01G149900.1	Wheat	cytosol	25.79	40.5
VIT_01s0026g01870.t01	Wine grape	cytosol	39.74	38.82
VIT_11s0016g01010.t01	Wine grape	cytosol	12.63	28.57

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100258679	wikigene:100258679	MapMan:18.4.1.37.1	Gene3D:3.30.200.20	EMBL:AM479236
ProteinID:CAN77488	ProteinID:CAN77488.1	ProteinID:CCB43817	ProteinID:CCB43817.1	UniProt:F6GUP0	EMBL:FN594951
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0004675
GO:GO:0004871	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886
GO:GO:0006464	GO:GO:0006468	GO:GO:0007154	GO:GO:0007165	GO:GO:0007166	GO:GO:0007178
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016301	GO:GO:0016740
GO:GO:0019538	GO:GO:0038023	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	EntrezGene:LOC100258679	wikigene:LOC100258679
PFAM:PF07714	PIRSF:PIRSF000654	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27001
PANTHER:PTHR27001:SF76	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS
TIGR:TC67797	UniParc:UPI00015C80F5	ArrayExpress:VIT_06s0004g00220	EnsemblPlantsGene:VIT_06s0004g00220	EnsemblPlants:VIT_06s0004g00220.t01	unigene:Vvi.14757
RefSeq:XP_002285747	RefSeq:XP_002285747.1	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr6:+:355847..359776

Molecular Weight (calculated)

42713.4 Da

IEP (calculated)

7.986

GRAVY (calculated)

-0.337

Length

380 amino acids

Sequence
(BLAST)

001: MGNCWCRWKP SIYRVSSNAK SESPKDQSPS VKPMKDIRKL PSNPEEVEDL RRDSAANPLI VFTFNELKQI TGNFRQDYVL GGGGFGSVYK GFVTEDLMEG
101: LQPLPVAVKV HDGDNSFQGH REWLAEVIFL GQLSHPNLVK LIGYGCEDEH RVLVYEYMAR GSVENNLFSR VLLPLSWYIR MKIAFGAAKG LAFLHDAEKP
201: VIYRDFKTSN ILLDLDYNPK LSDFGLAKDG PEGDKSHVST RIMGTYGYAA PEYIMTGHLS PRSDVYSFGV VLLELLTGRK SLDKSRPARE QNLTDWALPL
301: LREKKKLLNI IDPRLEGDYP VKGVHKAAML AYHCLNRNPK ARPLMRDIVD SLEPLQVATD VSPDKQTFTV ITNEVPNAAV

Best Arabidopsis Sequence Match ( AT5G56460.1 )
(BLAST)

001: MGNCWCRFEP LNHRVSANAK SESPKEQSPT VEDKHIKEVQ KLPSNPKEVE DLRRDSAANP LIAFTYEELK NITSNFRQDR VLGGGGFGSV YKGFIKEDLG
101: DQEVPEPLPV AVKVHDGDNS FQGHREWLAE VIFLGQLSHP NLVKLIGYCC EDNHRVLIYE YMARGSVENN LFSRVLLPLS WAIRMKIAFG AAKGLAFLHE
201: AKKPVIYRDF KTSNILLDMD YNAKLSDFGL AKDGPVGDKS HVSTRIMGTY GYAAPEYIMT GHLTPGSDVY SFGVVLLELL TGRKSLDKSR PTREQNLIDW
301: ALPLLKEKKK VLNIVDPKMN CEYPVKAVQK AAMLAYHCLN RNPKARPLMR DIVDSLEPLQ ATEEEALLVP PVQKAVITII DEMPKNGLKK VEELKKVEEV
401: KKVIEDAC

Arabidopsis Description

PBL16Probable serine/threonine-protein kinase PBL16 [Source:UniProtKB/Swiss-Prot;Acc:Q9FM85]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.