CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 2
plastid 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d027734_P004	Maize	cytosol, plastid	96.55	94.06
Os03t0159100-01	Rice	plasma membrane	91.25	91.49
TraesCS4D01G273600.1	Wheat	plastid	89.12	86.15
TraesCS4B01G275000.1	Wheat	plastid	88.59	85.64
HORVU4Hr1G073020.2	Barley	plastid	88.33	84.95
GSMUA_Achr3P14980_001	Banana	cytosol	25.99	79.03
VIT_06s0004g00220.t01	Wine grape	mitochondrion, plastid	74.8	74.21
TraesCS4A01G031000.1	Wheat	plastid	88.06	73.78
Solyc01g028830.2.1	Tomato	plastid	74.8	73.06
PGSC0003DMT400061697	Potato	cytosol, plastid	74.54	72.8
KRH43007	Soybean	cytosol	72.94	72.18
KRH59124	Soybean	cytosol, mitochondrion	71.35	70.42
AT5G56460.1	Thale cress	cytosol	75.6	69.85
EER91583	Sorghum	plastid	70.56	69.45
Bra002815.1-P	Field mustard	endoplasmic reticulum, plasma membrane	44.3	68.72
CDY20721	Canola	cytosol	74.54	67.71
CDY41811	Canola	cytosol	74.27	67.47
Bra035622.1-P	Field mustard	cytosol	72.68	67.16
CDY47750	Canola	cytosol	74.01	66.43
CDY32778	Canola	cytosol	73.74	66.03
GSMUA_Achr3P15000_001	Banana	cytosol	40.05	64.26
OQU91855	Sorghum	cytosol	47.75	60.0
EES15612	Sorghum	cytosol	58.62	53.9
EES09159	Sorghum	cytosol	58.36	53.66
KXG20794	Sorghum	plastid	49.34	48.69
EER89389	Sorghum	cytosol	53.32	44.67
OQU90248	Sorghum	mitochondrion	51.46	44.19
KXG20556	Sorghum	cytosol	53.58	43.35
OQU85819	Sorghum	plastid	50.66	42.83
EER98978	Sorghum	plastid	50.66	40.99
KXG40053	Sorghum	cytosol	50.66	40.72
EES13968	Sorghum	plastid	51.46	40.59
OQU92552	Sorghum	plastid	46.68	40.27
KXG25279	Sorghum	plastid	51.46	39.67
EER92149	Sorghum	plastid	48.28	37.84

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.37.1	Gene3D:3.30.200.20	EntrezGene:8059859	UniProt:C5WXS2	EnsemblPlants:EER95470
ProteinID:EER95470	ProteinID:EER95470.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672
GO:GO:0004674	GO:GO:0004675	GO:GO:0004871	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0005623	GO:GO:0005886	GO:GO:0006464	GO:GO:0006468	GO:GO:0007154	GO:GO:0007165
GO:GO:0007166	GO:GO:0007178	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020
GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	GO:GO:0038023	InterPro:IPR000719	InterPro:Kinase-like_dom_sf
PFAM:PF07714	PIRSF:PIRSF000654	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27001
PANTHER:PTHR27001:SF76	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	EnsemblPlantsGene:SORBI_3001G498000	SUPFAM:SSF56112	unigene:Sbi.12596
InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	UniParc:UPI0001A82FEE	RefSeq:XP_002468472.1	SEG:seg	:

Description

hypothetical protein

Coordinates

chr1:-:76780814..76784478

Molecular Weight (calculated)

42358.1 Da

IEP (calculated)

7.290

GRAVY (calculated)

-0.303

Length

377 amino acids

Sequence
(BLAST)

001: MGNCWFKGNP YFNRVSSNAT KSESPKIQSP SERTEKEDCQ LPSNPKEVEA LRKDTACNPL IAFTFEELKR ITKNFRQDSL LGGGGFGRVY KGFITKDLRE
101: GLEIEEPLRV AVKVHDGDNS FQGHREWLAE VIFLGQLSHP NLVKLIGYCC EDDHRVLVYE FMPLGSVESH LFSRVMVPLP WSIRMKIALG AAKGLAFLHE
201: AEKPVIYRDF KTSNILLDEE YNAKLSDFGL AKDGPVGDKS HVSTRIMGTY GYAAPEYIMT GHLTAMSDVY SYGVVLLELL TGRKSLDKSR PVREQMLADW
301: AFPLLTQKKK VLGIVDPRLA EDYPVKAVQK TSMLAYHCLS HNPKARPLMR DIVATLEPLQ QLEETPSDSV AMTLQGT

Best Arabidopsis Sequence Match ( AT5G56460.1 )
(BLAST)

001: MGNCWCRFEP LNHRVSANAK SESPKEQSPT VEDKHIKEVQ KLPSNPKEVE DLRRDSAANP LIAFTYEELK NITSNFRQDR VLGGGGFGSV YKGFIKEDLG
101: DQEVPEPLPV AVKVHDGDNS FQGHREWLAE VIFLGQLSHP NLVKLIGYCC EDNHRVLIYE YMARGSVENN LFSRVLLPLS WAIRMKIAFG AAKGLAFLHE
201: AKKPVIYRDF KTSNILLDMD YNAKLSDFGL AKDGPVGDKS HVSTRIMGTY GYAAPEYIMT GHLTPGSDVY SFGVVLLELL TGRKSLDKSR PTREQNLIDW
301: ALPLLKEKKK VLNIVDPKMN CEYPVKAVQK AAMLAYHCLN RNPKARPLMR DIVDSLEPLQ ATEEEALLVP PVQKAVITII DEMPKNGLKK VEELKKVEEV
401: KKVIEDAC

Arabidopsis Description

PBL16Probable serine/threonine-protein kinase PBL16 [Source:UniProtKB/Swiss-Prot;Acc:Q9FM85]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.