Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G60010.1 | CDX89333 | AT4G26455.1 | 21798944 |
| AT1G60010.1 | CDX94330 | AT4G26455.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY24507 | Canola | cytosol | 87.5 | 88.0 |
| AT1G60010.1 | Thale cress | cytosol | 76.14 | 77.46 |
| CDY30923 | Canola | cytosol | 71.02 | 70.62 |
| CDY70563 | Canola | cytosol | 70.45 | 69.27 |
| CDY07805 | Canola | nucleus | 53.98 | 57.23 |
| CDY34887 | Canola | cytosol | 52.84 | 56.02 |
| VIT_01s0026g00730.t01 | Wine grape | cytosol | 53.41 | 53.71 |
| Solyc05g006030.2.1 | Tomato | cytosol | 50.0 | 53.01 |
| KRH69484 | Soybean | cytosol | 51.7 | 52.91 |
| PGSC0003DMT400040233 | Potato | mitochondrion | 49.43 | 52.73 |
| KRH74672 | Soybean | cytosol | 51.14 | 52.33 |
| KRG99257 | Soybean | cytosol | 48.3 | 48.85 |
| KRH45741 | Soybean | cytosol | 48.3 | 48.3 |
| CDY00334 | Canola | nucleus | 40.91 | 45.0 |
| CDX84364 | Canola | cytosol | 40.91 | 45.0 |
| GSMUA_Achr5P23980_001 | Banana | cytosol | 33.52 | 43.07 |
| KXG30786 | Sorghum | cytosol | 39.77 | 41.67 |
| CDY21433 | Canola | cytosol | 35.8 | 40.13 |
| GSMUA_Achr9P28200_001 | Banana | cytosol | 38.07 | 40.12 |
| GSMUA_Achr3P06040_001 | Banana | cytosol | 39.77 | 39.77 |
| TraesCS7D01G194000.1 | Wheat | cytosol | 36.36 | 39.51 |
| TraesCS6A01G309500.1 | Wheat | cytosol | 40.34 | 39.44 |
| Zm00001d017998_P001 | Maize | cytosol | 38.64 | 39.31 |
| TraesCS7B01G098100.1 | Wheat | cytosol | 36.36 | 38.55 |
| TraesCS6B01G339300.1 | Wheat | cytosol | 39.2 | 38.33 |
| TraesCS6D01G288900.1 | Wheat | cytosol | 39.2 | 38.33 |
| TraesCS7A01G192700.1 | Wheat | cytosol | 36.36 | 38.32 |
| GSMUA_Achr9P18270_001 | Banana | cytosol | 39.2 | 37.91 |
| KXG19676 | Sorghum | cytosol | 36.93 | 37.36 |
| Zm00001d052277_P001 | Maize | cytosol | 35.23 | 36.9 |
| EER96686 | Sorghum | cytosol | 37.5 | 36.87 |
| Os02t0741700-01 | Rice | cytosol | 34.66 | 36.75 |
| Zm00001d020348_P001 | Maize | cytosol | 38.07 | 36.41 |
| OQU80443 | Sorghum | cytosol | 38.07 | 36.22 |
| Zm00001d037251_P001 | Maize | cytosol | 36.93 | 35.91 |
| GSMUA_Achr3P10380_001 | Banana | cytosol, nucleus, plastid | 37.5 | 35.68 |
| Os06t0236300-01 | Rice | cytosol | 38.07 | 35.45 |
| CDX87268 | Canola | cytosol | 31.82 | 35.0 |
| Zm00001d032324_P001 | Maize | cytosol | 36.93 | 34.95 |
| HORVU6Hr1G076380.4 | Barley | cytosol | 34.09 | 34.88 |
| Os09t0381600-01 | Rice | cytosol | 40.91 | 34.62 |
| TraesCS5A01G200100.1 | Wheat | cytosol | 38.64 | 34.52 |
| Os08t0420700-01 | Rice | cytosol, nucleus, plastid | 36.93 | 34.39 |
| TraesCS5B01G198500.1 | Wheat | cytosol | 38.64 | 34.0 |
| TraesCS5D01G205700.1 | Wheat | cytosol | 38.07 | 33.5 |
| HORVU5Hr1G059690.7 | Barley | nucleus | 38.64 | 33.5 |
| Zm00001d044783_P001 | Maize | cytosol | 32.95 | 33.33 |
| TraesCS5B01G198400.1 | Wheat | cytosol | 37.5 | 33.0 |
| HORVU7Hr1G039360.7 | Barley | cytosol | 31.82 | 32.18 |
| TraesCS2D01G082500.1 | Wheat | cytosol | 35.23 | 31.79 |
| TraesCS2D01G082600.1 | Wheat | cytosol | 36.36 | 31.68 |
| TraesCS2B01G099400.1 | Wheat | cytosol | 36.36 | 31.68 |
| TraesCS2A01G084700.1 | Wheat | cytosol | 35.8 | 31.5 |
| HORVU7Hr1G039390.1 | Barley | cytosol | 29.55 | 31.33 |
| TraesCS2A01G084600.1 | Wheat | cytosol | 35.23 | 31.31 |
| TraesCS2D01G082300.1 | Wheat | cytosol | 35.23 | 31.0 |
| TraesCS2B01G099100.1 | Wheat | nucleus | 35.23 | 31.0 |
| TraesCS2A01G084400.1 | Wheat | cytosol | 35.23 | 31.0 |
| TraesCS2A01G084500.1 | Wheat | cytosol | 35.8 | 30.73 |
| HORVU2Hr1G013820.4 | Barley | cytosol | 35.23 | 30.69 |
| TraesCS2B01G099200.1 | Wheat | nucleus | 34.09 | 30.0 |
| TraesCS2D01G082400.1 | Wheat | cytosol, mitochondrion, nucleus | 33.52 | 29.65 |
| CDY18668 | Canola | nucleus | 30.11 | 29.61 |
| CDX81304 | Canola | nucleus | 30.68 | 29.35 |
| CDY43585 | Canola | nucleus | 28.41 | 28.41 |
| CDY37844 | Canola | nucleus | 28.41 | 27.93 |
| CDY08733 | Canola | nucleus | 25.0 | 26.67 |
| CDY36508 | Canola | nucleus | 24.43 | 26.06 |
| TraesCS2B01G098900.1 | Wheat | nucleus, plastid | 23.86 | 23.2 |
Protein Annotations
| EnsemblPlants:CDY69854 | EnsemblPlantsGene:GSBRNA2T00093069001 | InterPro:DUF4228_plant | PANTHER:PTHR33413 | PANTHER:PTHR33413:SF4 | PFAM:PF14009 |
| ProteinID:CDY69854 | ProteinID:CDY69854.1 | UniParc:UPI0004EEFA99 | UniProt:A0A078JSR0 | MapMan:35.2 | : |
Description
BnaCnng65660DBnaCnng65660D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JSR0]
Coordinates
chrLK040501:+:309..1585
Molecular Weight (calculated)
19732.8 Da
IEP (calculated)
10.477
GRAVY (calculated)
-0.763
Length
176 amino acids
Sequence
(BLAST)
(BLAST)
001: MGNCQAVDAA ALVLQHPDGK IDRYYGPVSV AEIMRMHPGH YVSLIIPLPE ADIPAKTTAK EEDGKSQKRV VKFTRVKLLR PTENLVLGHA YRLITSQEVM
101: KVIRAKKYAK TKKHQNETTT REKKKPSLEK KVDGVSDKHQ NLETNDEKQR AVLTSSGSSK SKTWRPSLQS ISEAKS
101: KVIRAKKYAK TKKHQNETTT REKKKPSLEK KVDGVSDKHQ NLETNDEKQR AVLTSSGSSK SKTWRPSLQS ISEAKS
001: MGNCQAVDAA ALVLQHPDGK IDRYYGPVSV SEIMRMYPGH YVSLIIPLPE KNIPATTTTT DDKSERKVVR FTRVKLLRPT ENLVLGHAYR LITSQEVMKV
101: LRAKKYAKTK KHQSETSKEK KKPSSEKKID EESDKNQNLE TKDEKQRSVL TNSASSRSKT WRPSLQSISE ATS
101: LRAKKYAKTK KHQSETSKEK KKPSSEKKID EESDKNQNLE TKDEKQRSVL TNSASSRSKT WRPSLQSISE ATS
Arabidopsis Description
D-ribose-binding periplasmic protein [Source:UniProtKB/TrEMBL;Acc:Q9ZUJ2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.