Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G60010.1 | KRH56393 | AT4G26455.1 | 21798944 |
| AT1G60010.1 | KRH62532 | AT4G26455.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRG99257 | Soybean | cytosol | 92.61 | 93.68 |
| KRH74672 | Soybean | cytosol | 59.66 | 61.05 |
| KRH69484 | Soybean | cytosol | 59.66 | 61.05 |
| Solyc05g006030.2.1 | Tomato | cytosol | 53.98 | 57.23 |
| PGSC0003DMT400040233 | Potato | mitochondrion | 53.41 | 56.97 |
| VIT_01s0026g00730.t01 | Wine grape | cytosol | 52.27 | 52.57 |
| AT1G60010.1 | Thale cress | cytosol | 48.86 | 49.71 |
| GSMUA_Achr5P23980_001 | Banana | cytosol | 38.07 | 48.91 |
| CDY24507 | Canola | cytosol | 48.3 | 48.57 |
| Bra035410.1-P | Field mustard | cytosol | 48.3 | 48.57 |
| CDY69854 | Canola | cytosol | 48.3 | 48.3 |
| AT1G10530.1 | Thale cress | cytosol, mitochondrion, nucleus, plastid | 45.45 | 48.19 |
| Bra031717.1-P | Field mustard | cytosol | 44.89 | 47.59 |
| KXG30786 | Sorghum | cytosol | 44.89 | 47.02 |
| CDY34887 | Canola | cytosol | 44.32 | 46.99 |
| CDY07805 | Canola | nucleus | 44.32 | 46.99 |
| Bra027820.1-P | Field mustard | cytosol | 47.16 | 46.89 |
| CDY30923 | Canola | cytosol | 47.16 | 46.89 |
| TraesCS7B01G098100.1 | Wheat | cytosol | 43.75 | 46.39 |
| CDY70563 | Canola | cytosol | 47.16 | 46.37 |
| KRH63480 | Soybean | cytosol | 44.89 | 45.66 |
| TraesCS7A01G192700.1 | Wheat | cytosol | 43.18 | 45.51 |
| GSMUA_Achr3P06040_001 | Banana | cytosol | 45.45 | 45.45 |
| KRH57030 | Soybean | cytosol | 46.02 | 45.0 |
| GSMUA_Achr9P28200_001 | Banana | cytosol | 42.61 | 44.91 |
| Zm00001d017998_P001 | Maize | cytosol | 43.75 | 44.51 |
| KRH03351 | Soybean | cytosol | 46.02 | 44.51 |
| TraesCS7D01G194000.1 | Wheat | cytosol | 40.91 | 44.44 |
| KRH54436 | Soybean | cytosol | 45.45 | 44.2 |
| TraesCS6A01G309500.1 | Wheat | cytosol | 42.05 | 41.11 |
| Os02t0741700-01 | Rice | cytosol | 38.64 | 40.96 |
| Zm00001d037251_P001 | Maize | cytosol | 42.05 | 40.88 |
| GSMUA_Achr9P18270_001 | Banana | cytosol | 42.05 | 40.66 |
| Zm00001d020348_P001 | Maize | cytosol | 42.05 | 40.22 |
| Os08t0420700-01 | Rice | cytosol, nucleus, plastid | 42.61 | 39.68 |
| EER96686 | Sorghum | cytosol | 40.34 | 39.66 |
| KXG19676 | Sorghum | cytosol | 39.2 | 39.66 |
| OQU80443 | Sorghum | cytosol | 41.48 | 39.46 |
| TraesCS6B01G339300.1 | Wheat | cytosol | 40.34 | 39.44 |
| TraesCS6D01G288900.1 | Wheat | cytosol | 40.34 | 39.44 |
| Zm00001d052277_P001 | Maize | cytosol | 36.93 | 38.69 |
| Zm00001d044783_P001 | Maize | cytosol | 38.07 | 38.51 |
| TraesCS5B01G198500.1 | Wheat | cytosol | 43.75 | 38.5 |
| Os06t0236300-01 | Rice | cytosol | 40.91 | 38.1 |
| TraesCS5D01G205700.1 | Wheat | cytosol | 43.18 | 38.0 |
| TraesCS5B01G198400.1 | Wheat | cytosol | 43.18 | 38.0 |
| Os09t0381600-01 | Rice | cytosol | 44.89 | 37.98 |
| HORVU6Hr1G076380.4 | Barley | cytosol | 36.93 | 37.79 |
| Zm00001d032324_P001 | Maize | cytosol | 39.77 | 37.63 |
| TraesCS5A01G200100.1 | Wheat | cytosol | 42.05 | 37.56 |
| TraesCS2A01G084600.1 | Wheat | cytosol | 41.48 | 36.87 |
| HORVU7Hr1G039360.7 | Barley | cytosol | 36.36 | 36.78 |
| GSMUA_Achr3P10380_001 | Banana | cytosol, nucleus, plastid | 38.64 | 36.76 |
| HORVU7Hr1G039390.1 | Barley | cytosol | 34.66 | 36.75 |
| TraesCS2D01G082300.1 | Wheat | cytosol | 41.48 | 36.5 |
| TraesCS2A01G084400.1 | Wheat | cytosol | 41.48 | 36.5 |
| TraesCS2D01G082600.1 | Wheat | cytosol | 41.48 | 36.14 |
| TraesCS2B01G099100.1 | Wheat | nucleus | 40.91 | 36.0 |
| HORVU5Hr1G059690.7 | Barley | nucleus | 41.48 | 35.96 |
| TraesCS2D01G082500.1 | Wheat | cytosol | 39.77 | 35.9 |
| TraesCS2D01G082400.1 | Wheat | cytosol, mitochondrion, nucleus | 39.77 | 35.18 |
| TraesCS2B01G099400.1 | Wheat | cytosol | 40.34 | 35.15 |
| TraesCS2B01G099200.1 | Wheat | nucleus | 39.77 | 35.0 |
| TraesCS2A01G084700.1 | Wheat | cytosol | 39.77 | 35.0 |
| HORVU2Hr1G013820.4 | Barley | cytosol | 39.77 | 34.65 |
| TraesCS2A01G084500.1 | Wheat | cytosol | 40.34 | 34.63 |
| KRH04405 | Soybean | cytosol | 34.66 | 34.27 |
| KRH58136 | Soybean | nucleus | 33.52 | 32.78 |
| TraesCS2B01G098900.1 | Wheat | nucleus, plastid | 30.11 | 29.28 |
Protein Annotations
| EMBL:ACUP02005284 | EnsemblPlants:KRH45741 | EnsemblPlantsGene:GLYMA_08G290800 | InterPro:DUF4228_plant | PANTHER:PTHR33413 | PANTHER:PTHR33413:SF4 |
| PFAM:PF14009 | ProteinID:KRH45741 | ProteinID:KRH45741.1 | SEG:seg | UniParc:UPI000233854A | UniProt:A0A0R0IU10 |
| MapMan:35.2 | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr8:+:40464421..40465898
Molecular Weight (calculated)
19653.9 Da
IEP (calculated)
10.390
GRAVY (calculated)
-0.384
Length
176 amino acids
Sequence
(BLAST)
(BLAST)
001: MGNCQAVDAA ALVIQHPSGK IERLYWPVSA SEVMRTNPGH YVSLIIPLAV PDDQGQINQE QQKAVLFTRV KLLRPNETLT LGHAYRLVTT QEVVKAVKAK
101: KHAKMRKPQV KAMEGMQIVQ LEKPVSDSES TGGMLDTRNI YQAMRTDRYR LMSSTHAALK LKSWRPSLQS ISESAS
101: KHAKMRKPQV KAMEGMQIVQ LEKPVSDSES TGGMLDTRNI YQAMRTDRYR LMSSTHAALK LKSWRPSLQS ISESAS
001: MGNCQAVDAA ALVLQHPDGK IDRYYGPVSV SEIMRMYPGH YVSLIIPLPE KNIPATTTTT DDKSERKVVR FTRVKLLRPT ENLVLGHAYR LITSQEVMKV
101: LRAKKYAKTK KHQSETSKEK KKPSSEKKID EESDKNQNLE TKDEKQRSVL TNSASSRSKT WRPSLQSISE ATS
101: LRAKKYAKTK KHQSETSKEK KKPSSEKKID EESDKNQNLE TKDEKQRSVL TNSASSRSKT WRPSLQSISE ATS
Arabidopsis Description
D-ribose-binding periplasmic protein [Source:UniProtKB/TrEMBL;Acc:Q9ZUJ2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.