Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 1
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Os04t0471300-01 | |
| Os08t0497900-01 | |
| Os09t0481300-01 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G60010.1 | Os04t0471300-01 | AT4G26455.1 | 21798944 |
| AT1G60010.1 | Os08t0497900-01 | AT4G26455.1 | 21798944 |
| AT1G60010.1 | Os09t0481300-01 | AT4G26455.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EER96686 | Sorghum | cytosol | 62.02 | 72.07 |
| Zm00001d020348_P001 | Maize | cytosol | 61.54 | 69.57 |
| HORVU5Hr1G059690.7 | Barley | nucleus | 64.42 | 66.01 |
| TraesCS5D01G205700.1 | Wheat | cytosol | 62.5 | 65.0 |
| TraesCS5B01G198500.1 | Wheat | cytosol | 62.5 | 65.0 |
| TraesCS5B01G198400.1 | Wheat | cytosol | 62.02 | 64.5 |
| TraesCS5A01G200100.1 | Wheat | cytosol | 60.58 | 63.96 |
| GSMUA_Achr5P23980_001 | Banana | cytosol | 40.38 | 61.31 |
| GSMUA_Achr9P28200_001 | Banana | cytosol | 46.15 | 57.48 |
| Os08t0420700-01 | Rice | cytosol, nucleus, plastid | 50.96 | 56.08 |
| GSMUA_Achr9P18270_001 | Banana | cytosol | 46.63 | 53.3 |
| Os02t0741700-01 | Rice | cytosol | 40.38 | 50.6 |
| GSMUA_Achr3P10380_001 | Banana | cytosol, nucleus, plastid | 44.23 | 49.73 |
| GSMUA_Achr3P06040_001 | Banana | cytosol | 40.87 | 48.3 |
| Os06t0236300-01 | Rice | cytosol | 42.31 | 46.56 |
| Solyc05g006030.2.1 | Tomato | cytosol | 37.02 | 46.39 |
| PGSC0003DMT400040233 | Potato | mitochondrion | 36.54 | 46.06 |
| KRG99257 | Soybean | cytosol | 38.46 | 45.98 |
| KRH57030 | Soybean | cytosol | 39.42 | 45.56 |
| KRH69484 | Soybean | cytosol | 37.5 | 45.35 |
| KRH03351 | Soybean | cytosol | 39.42 | 45.05 |
| KRH45741 | Soybean | cytosol | 37.98 | 44.89 |
| KRH74672 | Soybean | cytosol | 37.02 | 44.77 |
| VIT_01s0026g00730.t01 | Wine grape | cytosol | 37.5 | 44.57 |
| KRH63480 | Soybean | cytosol | 36.54 | 43.93 |
| AT5G50090.1 | Thale cress | cytosol | 32.69 | 42.77 |
| Solyc06g071320.2.1 | Tomato | cytosol | 31.25 | 41.94 |
| CDY00334 | Canola | nucleus | 32.21 | 41.88 |
| CDX84364 | Canola | cytosol | 32.21 | 41.88 |
| Bra010130.1-P | Field mustard | nucleus | 32.21 | 41.88 |
| PGSC0003DMT400083024 | Potato | cytosol | 32.21 | 41.61 |
| KRH54436 | Soybean | cytosol | 36.06 | 41.44 |
| AT5G62900.1 | Thale cress | cytosol | 31.73 | 40.99 |
| CDY69854 | Canola | cytosol | 34.62 | 40.91 |
| Bra000609.1-P | Field mustard | cytosol | 30.77 | 40.76 |
| PGSC0003DMT400063216 | Potato | cytosol | 36.54 | 40.64 |
| AT1G60010.1 | Thale cress | cytosol | 33.65 | 40.46 |
| Bra031717.1-P | Field mustard | cytosol | 32.21 | 40.36 |
| CDY07805 | Canola | nucleus | 32.21 | 40.36 |
| CDY21433 | Canola | cytosol | 30.29 | 40.13 |
| CDY24507 | Canola | cytosol | 33.65 | 40.0 |
| Bra035410.1-P | Field mustard | cytosol | 33.65 | 40.0 |
| VIT_17s0000g07840.t01 | Wine grape | cytosol | 35.1 | 39.67 |
| CDY30923 | Canola | cytosol | 33.65 | 39.55 |
| Bra027820.1-P | Field mustard | cytosol | 33.65 | 39.55 |
| AT1G10530.1 | Thale cress | cytosol, mitochondrion, nucleus, plastid | 31.25 | 39.16 |
| CDY34887 | Canola | cytosol | 31.25 | 39.16 |
| CDY70563 | Canola | cytosol | 33.65 | 39.11 |
| Bra035874.1-P | Field mustard | cytosol | 30.29 | 37.72 |
| CDX87268 | Canola | cytosol | 28.85 | 37.5 |
| Solyc03g114020.2.1 | Tomato | cytosol | 33.65 | 37.43 |
| Os03t0200200-01 | Rice | cytosol | 34.13 | 33.02 |
| Os10t0352000-01 | Rice | cytosol | 19.71 | 24.85 |
Protein Annotations
| EMBL:AK107716 | EnsemblPlants:Os09t0381600-01 | EnsemblPlantsGene:Os09g0381600 | EntrezGene:4346935 | InterPro:DUF4228_plant | PANTHER:PTHR33413 |
| PANTHER:PTHR33413:SF7 | PFAM:PF14009 | ProteinID:BAD25830.1 | ProteinID:BAD26100.1 | ProteinID:BAF24975.1 | ProteinID:BAT07857.1 |
| ProteinID:EAZ44574.1 | RefSeq:XP_015610809.1 | SEG:seg | UniParc:UPI00003B455A | UniProt:Q6H599 | MapMan:35.2 |
Description
Conserved hypothetical protein. (Os09t0381600-01)
Coordinates
chr9:+:12913683..12914824
Molecular Weight (calculated)
21658.4 Da
IEP (calculated)
10.040
GRAVY (calculated)
-0.632
Length
208 amino acids
Sequence
(BLAST)
(BLAST)
001: MGNCQAAEAA AVVIQHPGGK VERLYWPTTA ADVMRANPGH YVALVILRIS ADKAASAAAA GDNKTNAGGA TGGGGGGAKI TRVKLLKPKD TLLLGQVYRL
101: ITSQEVTKAL RARKNEKMRR CEAIRQQHEQ LRRGDPLAGV AEEEEEEESA SDDQDGKRDR HRSSGAGAPP AAGGRGRHWR PSLQSISEAA SQSGGGGGGS
201: SISESAAR
101: ITSQEVTKAL RARKNEKMRR CEAIRQQHEQ LRRGDPLAGV AEEEEEEESA SDDQDGKRDR HRSSGAGAPP AAGGRGRHWR PSLQSISEAA SQSGGGGGGS
201: SISESAAR
001: MGNCQAVDAA ALVLQHPDGK IDRYYGPVSV SEIMRMYPGH YVSLIIPLPE KNIPATTTTT DDKSERKVVR FTRVKLLRPT ENLVLGHAYR LITSQEVMKV
101: LRAKKYAKTK KHQSETSKEK KKPSSEKKID EESDKNQNLE TKDEKQRSVL TNSASSRSKT WRPSLQSISE ATS
101: LRAKKYAKTK KHQSETSKEK KKPSSEKKID EESDKNQNLE TKDEKQRSVL TNSASSRSKT WRPSLQSISE ATS
Arabidopsis Description
D-ribose-binding periplasmic protein [Source:UniProtKB/TrEMBL;Acc:Q9ZUJ2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.