Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 1
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400083024 | Potato | cytosol | 73.55 | 70.81 |
| Solyc03g114020.2.1 | Tomato | cytosol | 64.52 | 53.48 |
| KRH63480 | Soybean | cytosol | 51.61 | 46.24 |
| AT5G50090.1 | Thale cress | cytosol | 45.81 | 44.65 |
| KRH54436 | Soybean | cytosol | 50.32 | 43.09 |
| GSMUA_Achr5P23980_001 | Banana | cytosol | 37.42 | 42.34 |
| Solyc05g006030.2.1 | Tomato | cytosol | 45.16 | 42.17 |
| KRH03351 | Soybean | cytosol | 49.03 | 41.76 |
| KRH57030 | Soybean | cytosol | 48.39 | 41.67 |
| Bra000609.1-P | Field mustard | cytosol | 41.94 | 41.4 |
| VIT_17s0000g07840.t01 | Wine grape | cytosol | 49.03 | 41.3 |
| CDY21433 | Canola | cytosol | 40.65 | 40.13 |
| CDY00334 | Canola | nucleus | 40.0 | 38.75 |
| CDX84364 | Canola | cytosol | 40.0 | 38.75 |
| Bra010130.1-P | Field mustard | nucleus | 40.0 | 38.75 |
| Bra035874.1-P | Field mustard | cytosol | 40.65 | 37.72 |
| GSMUA_Achr9P18270_001 | Banana | cytosol | 43.87 | 37.36 |
| AT5G62900.1 | Thale cress | cytosol | 38.71 | 37.27 |
| KXG30786 | Sorghum | cytosol | 40.0 | 36.9 |
| GSMUA_Achr9P28200_001 | Banana | cytosol | 39.35 | 36.53 |
| Zm00001d017998_P001 | Maize | cytosol | 40.0 | 35.84 |
| TraesCS6B01G339300.1 | Wheat | cytosol | 40.65 | 35.0 |
| TraesCS6D01G288900.1 | Wheat | cytosol | 40.65 | 35.0 |
| EER96686 | Sorghum | cytosol | 40.0 | 34.64 |
| TraesCS6A01G309500.1 | Wheat | cytosol | 40.0 | 34.44 |
| CDX87268 | Canola | cytosol | 35.48 | 34.38 |
| TraesCS7D01G194000.1 | Wheat | cytosol | 35.48 | 33.95 |
| TraesCS7B01G098100.1 | Wheat | cytosol | 36.13 | 33.73 |
| TraesCS7A01G192700.1 | Wheat | cytosol | 36.13 | 33.53 |
| KXG19676 | Sorghum | cytosol | 37.42 | 33.33 |
| Zm00001d032324_P001 | Maize | cytosol | 40.0 | 33.33 |
| TraesCS5A01G200100.1 | Wheat | cytosol | 41.94 | 32.99 |
| OQU80443 | Sorghum | cytosol | 39.35 | 32.97 |
| GSMUA_Achr3P10380_001 | Banana | cytosol, nucleus, plastid | 39.35 | 32.97 |
| GSMUA_Achr3P06040_001 | Banana | cytosol | 37.42 | 32.95 |
| Zm00001d020348_P001 | Maize | cytosol | 38.71 | 32.61 |
| Solyc02g092240.2.1 | Tomato | cytosol | 36.77 | 32.57 |
| Os06t0236300-01 | Rice | cytosol | 39.35 | 32.28 |
| Os08t0420700-01 | Rice | cytosol, nucleus, plastid | 39.35 | 32.28 |
| TraesCS5D01G205700.1 | Wheat | cytosol | 41.29 | 32.0 |
| HORVU5Hr1G059690.7 | Barley | nucleus | 41.29 | 31.53 |
| TraesCS5B01G198500.1 | Wheat | cytosol | 40.65 | 31.5 |
| TraesCS5B01G198400.1 | Wheat | cytosol | 40.65 | 31.5 |
| Os09t0381600-01 | Rice | cytosol | 41.94 | 31.25 |
| Zm00001d037251_P001 | Maize | cytosol | 36.13 | 30.94 |
| HORVU6Hr1G076380.4 | Barley | cytosol | 34.19 | 30.81 |
| Zm00001d052277_P001 | Maize | cytosol | 32.9 | 30.36 |
| Os02t0741700-01 | Rice | cytosol | 30.97 | 28.92 |
| Zm00001d044783_P001 | Maize | cytosol | 32.26 | 28.74 |
| HORVU7Hr1G039360.7 | Barley | cytosol | 32.26 | 28.74 |
| TraesCS2D01G082400.1 | Wheat | cytosol, mitochondrion, nucleus | 36.77 | 28.64 |
| TraesCS2A01G084600.1 | Wheat | cytosol | 36.13 | 28.28 |
| TraesCS2B01G099100.1 | Wheat | nucleus | 36.13 | 28.0 |
| TraesCS2A01G084700.1 | Wheat | cytosol | 36.13 | 28.0 |
| HORVU7Hr1G039390.1 | Barley | cytosol | 29.68 | 27.71 |
| TraesCS2D01G082500.1 | Wheat | cytosol | 34.84 | 27.69 |
| TraesCS2D01G082300.1 | Wheat | cytosol | 35.48 | 27.5 |
| TraesCS2B01G099200.1 | Wheat | nucleus | 35.48 | 27.5 |
| TraesCS2A01G084400.1 | Wheat | cytosol | 35.48 | 27.5 |
| TraesCS2A01G084500.1 | Wheat | cytosol | 36.13 | 27.32 |
| TraesCS2B01G099400.1 | Wheat | cytosol | 35.48 | 27.23 |
| HORVU2Hr1G013820.4 | Barley | cytosol | 34.84 | 26.73 |
| TraesCS2D01G082600.1 | Wheat | cytosol | 34.84 | 26.73 |
| TraesCS2B01G098900.1 | Wheat | nucleus, plastid | 22.58 | 19.34 |
Protein Annotations
| EnsemblPlants:Solyc06g071320.2.1 | EnsemblPlantsGene:Solyc06g071320.2 | InterPro:DUF4228_plant | PANTHER:PTHR33413 | PANTHER:PTHR33413:SF5 | PFAM:PF14009 |
| ProteinID:AAX95759.1 | SEG:seg | UniParc:UPI000050977C | UniProt:Q53J17 | MapMan:35.2 | : |
Description
T10O24.15, related [Source:UniProtKB/TrEMBL;Acc:Q53J17]
Coordinates
chr6:-:43886576..43887531
Molecular Weight (calculated)
17306.0 Da
IEP (calculated)
10.413
GRAVY (calculated)
-0.483
Length
155 amino acids
Sequence
(BLAST)
(BLAST)
001: MGNCQAIDNA ALLLQHPNGK VEKLYSSVTA HQIMKINSGH YVSLLLTTTT TATNNKTPVR VRRIKLLKPN DSLVLGQIYR LVTAQEVMKG LCAKKYAKLK
101: QLEYSCEKLT QKSNWNPGSV LENSKQVKQE KHRNSTGARC RAWHPSLQSI SEAAC
101: QLEYSCEKLT QKSNWNPGSV LENSKQVKQE KHRNSTGARC RAWHPSLQSI SEAAC
001: MGNCQAVDAA ALVLQHPDGK IDRYYGPVSV SEIMRMYPGH YVSLIIPLPE KNIPATTTTT DDKSERKVVR FTRVKLLRPT ENLVLGHAYR LITSQEVMKV
101: LRAKKYAKTK KHQSETSKEK KKPSSEKKID EESDKNQNLE TKDEKQRSVL TNSASSRSKT WRPSLQSISE ATS
101: LRAKKYAKTK KHQSETSKEK KKPSSEKKID EESDKNQNLE TKDEKQRSVL TNSASSRSKT WRPSLQSISE ATS
Arabidopsis Description
D-ribose-binding periplasmic protein [Source:UniProtKB/TrEMBL;Acc:Q9ZUJ2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.