Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7A01G192700.1 | Wheat | cytosol | 98.19 | 97.6 |
| TraesCS7D01G194000.1 | Wheat | cytosol | 84.94 | 87.04 |
| HORVU7Hr1G039390.1 | Barley | cytosol | 63.25 | 63.25 |
| KXG19676 | Sorghum | cytosol | 65.06 | 62.07 |
| HORVU7Hr1G039360.7 | Barley | cytosol | 63.25 | 60.34 |
| Zm00001d037251_P001 | Maize | cytosol | 63.25 | 58.01 |
| Os06t0236300-01 | Rice | cytosol | 65.06 | 57.14 |
| TraesCS6B01G339300.1 | Wheat | cytosol | 60.84 | 56.11 |
| GSMUA_Achr5P23980_001 | Banana | cytosol | 45.78 | 55.47 |
| Zm00001d044783_P001 | Maize | cytosol | 53.61 | 51.15 |
| GSMUA_Achr9P28200_001 | Banana | cytosol | 48.8 | 48.5 |
| GSMUA_Achr9P18270_001 | Banana | cytosol | 51.81 | 47.25 |
| GSMUA_Achr3P06040_001 | Banana | cytosol | 50.0 | 47.16 |
| KRG99257 | Soybean | cytosol | 46.39 | 44.25 |
| KRH45741 | Soybean | cytosol | 46.39 | 43.75 |
| GSMUA_Achr3P10380_001 | Banana | cytosol, nucleus, plastid | 46.99 | 42.16 |
| KRH74672 | Soybean | cytosol | 42.77 | 41.28 |
| KRH69484 | Soybean | cytosol | 42.77 | 41.28 |
| TraesCS5B01G198400.1 | Wheat | cytosol | 49.4 | 41.0 |
| TraesCS5B01G198500.1 | Wheat | cytosol | 49.4 | 41.0 |
| VIT_01s0026g00730.t01 | Wine grape | cytosol | 42.17 | 40.0 |
| AT5G50090.1 | Thale cress | cytosol | 37.95 | 39.62 |
| TraesCS2B01G099200.1 | Wheat | nucleus | 47.59 | 39.5 |
| TraesCS2B01G099100.1 | Wheat | nucleus | 46.99 | 39.0 |
| Bra000609.1-P | Field mustard | cytosol | 36.75 | 38.85 |
| AT5G62900.1 | Thale cress | cytosol | 37.35 | 38.51 |
| PGSC0003DMT400040233 | Potato | mitochondrion | 37.95 | 38.18 |
| AT1G60010.1 | Thale cress | cytosol | 39.76 | 38.15 |
| TraesCS2B01G099400.1 | Wheat | cytosol | 46.39 | 38.12 |
| CDY30923 | Canola | cytosol | 40.36 | 37.85 |
| CDY21433 | Canola | cytosol | 35.54 | 37.58 |
| Bra010130.1-P | Field mustard | nucleus | 36.14 | 37.5 |
| CDX84364 | Canola | cytosol | 36.14 | 37.5 |
| CDY00334 | Canola | nucleus | 36.14 | 37.5 |
| AT1G10530.1 | Thale cress | cytosol, mitochondrion, nucleus, plastid | 37.35 | 37.35 |
| Bra027820.1-P | Field mustard | cytosol | 39.76 | 37.29 |
| CDY70563 | Canola | cytosol | 39.76 | 36.87 |
| KRH03351 | Soybean | cytosol | 40.36 | 36.81 |
| Solyc05g006030.2.1 | Tomato | cytosol | 36.75 | 36.75 |
| CDY24507 | Canola | cytosol | 38.55 | 36.57 |
| Bra035410.1-P | Field mustard | cytosol | 38.55 | 36.57 |
| KRH63480 | Soybean | cytosol | 37.95 | 36.42 |
| CDY69854 | Canola | cytosol | 38.55 | 36.36 |
| Solyc06g071320.2.1 | Tomato | cytosol | 33.73 | 36.13 |
| KRH57030 | Soybean | cytosol | 39.16 | 36.11 |
| KRH54436 | Soybean | cytosol | 39.16 | 35.91 |
| VIT_17s0000g07840.t01 | Wine grape | cytosol | 39.76 | 35.87 |
| CDY07805 | Canola | nucleus | 35.54 | 35.54 |
| CDY34887 | Canola | cytosol | 34.94 | 34.94 |
| Bra031717.1-P | Field mustard | cytosol | 34.94 | 34.94 |
| PGSC0003DMT400083024 | Potato | cytosol | 33.73 | 34.78 |
| PGSC0003DMT400063216 | Potato | cytosol | 39.16 | 34.76 |
| Solyc03g114020.2.1 | Tomato | cytosol | 39.16 | 34.76 |
| Bra035874.1-P | Field mustard | cytosol | 34.94 | 34.73 |
| CDX87268 | Canola | cytosol | 31.93 | 33.12 |
| TraesCS2B01G098900.1 | Wheat | nucleus, plastid | 32.53 | 29.83 |
| TraesCS4B01G260900.1 | Wheat | cytosol | 36.14 | 26.91 |
Protein Annotations
| EnsemblPlants:TraesCS7B01G098100.1 | EnsemblPlantsGene:TraesCS7B01G098100 | InterPro:DUF4228_plant | PANTHER:PTHR33413 | PANTHER:PTHR33413:SF6 | PFAM:PF14009 |
| SEG:seg | MapMan:35.2 | : | : | : | : |
Description
No Description!
Coordinates
chr7B:+:113060215..113062437
Molecular Weight (calculated)
18356.5 Da
IEP (calculated)
10.268
GRAVY (calculated)
-0.845
Length
166 amino acids
Sequence
(BLAST)
(BLAST)
001: MGNCQAAEEA TVVVQHPGGR VERLYWATSA AEVMRANPGH YVALVTLRVT EGDGQQQRRG AVRLTRVKLL KPRDTLQLGH AYRLIAVDEV TRAVQARKEE
101: KTRRAQRQRQ QAGGGPASAG DDQSLMDDGL DQLEQQDRDG HPSSSTKGSR HRQWRPSLHS IAEVSS
101: KTRRAQRQRQ QAGGGPASAG DDQSLMDDGL DQLEQQDRDG HPSSSTKGSR HRQWRPSLHS IAEVSS
001: MGNCQAVDAA ALVLQHPDGK IDRYYGPVSV SEIMRMYPGH YVSLIIPLPE KNIPATTTTT DDKSERKVVR FTRVKLLRPT ENLVLGHAYR LITSQEVMKV
101: LRAKKYAKTK KHQSETSKEK KKPSSEKKID EESDKNQNLE TKDEKQRSVL TNSASSRSKT WRPSLQSISE ATS
101: LRAKKYAKTK KHQSETSKEK KKPSSEKKID EESDKNQNLE TKDEKQRSVL TNSASSRSKT WRPSLQSISE ATS
Arabidopsis Description
D-ribose-binding periplasmic protein [Source:UniProtKB/TrEMBL;Acc:Q9ZUJ2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.