Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5D01G205700.1 | Wheat | cytosol | 98.5 | 98.5 |
| TraesCS5B01G198400.1 | Wheat | cytosol | 98.5 | 98.5 |
| TraesCS5A01G200100.1 | Wheat | cytosol | 87.0 | 88.32 |
| HORVU5Hr1G059690.7 | Barley | nucleus | 85.5 | 84.24 |
| Zm00001d020348_P001 | Maize | cytosol | 62.5 | 67.93 |
| EER96686 | Sorghum | cytosol | 59.5 | 66.48 |
| Os09t0381600-01 | Rice | cytosol | 65.0 | 62.5 |
| GSMUA_Achr5P23980_001 | Banana | cytosol | 39.0 | 56.93 |
| GSMUA_Achr9P28200_001 | Banana | cytosol | 45.0 | 53.89 |
| TraesCS7B01G098100.1 | Wheat | cytosol | 41.0 | 49.4 |
| GSMUA_Achr9P18270_001 | Banana | cytosol | 44.5 | 48.9 |
| GSMUA_Achr3P10380_001 | Banana | cytosol, nucleus, plastid | 44.5 | 48.11 |
| TraesCS6B01G339300.1 | Wheat | cytosol | 41.0 | 45.56 |
| TraesCS2B01G099400.1 | Wheat | cytosol | 46.0 | 45.54 |
| Solyc05g006030.2.1 | Tomato | cytosol | 37.5 | 45.18 |
| TraesCS2B01G099200.1 | Wheat | nucleus | 45.0 | 45.0 |
| TraesCS2B01G099100.1 | Wheat | nucleus | 45.0 | 45.0 |
| KRH57030 | Soybean | cytosol | 40.5 | 45.0 |
| KRG99257 | Soybean | cytosol | 39.0 | 44.83 |
| KRH03351 | Soybean | cytosol | 40.5 | 44.51 |
| GSMUA_Achr3P06040_001 | Banana | cytosol | 39.0 | 44.32 |
| PGSC0003DMT400040233 | Potato | mitochondrion | 36.5 | 44.24 |
| KRH45741 | Soybean | cytosol | 38.5 | 43.75 |
| KRH69484 | Soybean | cytosol | 37.5 | 43.6 |
| KRH74672 | Soybean | cytosol | 37.0 | 43.02 |
| KRH63480 | Soybean | cytosol | 36.5 | 42.2 |
| VIT_01s0026g00730.t01 | Wine grape | cytosol | 36.0 | 41.14 |
| PGSC0003DMT400083024 | Potato | cytosol | 33.0 | 40.99 |
| KRH54436 | Soybean | cytosol | 37.0 | 40.88 |
| Solyc06g071320.2.1 | Tomato | cytosol | 31.5 | 40.65 |
| AT5G50090.1 | Thale cress | cytosol | 32.0 | 40.25 |
| Bra000609.1-P | Field mustard | cytosol | 31.5 | 40.13 |
| VIT_17s0000g07840.t01 | Wine grape | cytosol | 36.5 | 39.67 |
| AT1G60010.1 | Thale cress | cytosol | 34.0 | 39.31 |
| AT1G10530.1 | Thale cress | cytosol, mitochondrion, nucleus, plastid | 32.5 | 39.16 |
| CDY07805 | Canola | nucleus | 32.5 | 39.16 |
| AT5G62900.1 | Thale cress | cytosol | 31.5 | 39.13 |
| Bra035410.1-P | Field mustard | cytosol | 34.0 | 38.86 |
| CDY24507 | Canola | cytosol | 34.0 | 38.86 |
| CDY21433 | Canola | cytosol | 30.5 | 38.85 |
| CDY00334 | Canola | nucleus | 31.0 | 38.75 |
| CDX84364 | Canola | cytosol | 31.0 | 38.75 |
| Bra010130.1-P | Field mustard | nucleus | 31.0 | 38.75 |
| CDY69854 | Canola | cytosol | 34.0 | 38.64 |
| Bra031717.1-P | Field mustard | cytosol | 32.0 | 38.55 |
| Bra027820.1-P | Field mustard | cytosol | 34.0 | 38.42 |
| CDY30923 | Canola | cytosol | 34.0 | 38.42 |
| CDY70563 | Canola | cytosol | 34.0 | 37.99 |
| CDY34887 | Canola | cytosol | 31.5 | 37.95 |
| PGSC0003DMT400063216 | Potato | cytosol | 35.0 | 37.43 |
| Bra035874.1-P | Field mustard | cytosol | 30.5 | 36.53 |
| Solyc03g114020.2.1 | Tomato | cytosol | 34.0 | 36.36 |
| CDX87268 | Canola | cytosol | 28.0 | 35.0 |
| TraesCS2B01G098900.1 | Wheat | nucleus, plastid | 29.5 | 32.6 |
| TraesCS4B01G260900.1 | Wheat | cytosol | 34.0 | 30.49 |
Protein Annotations
| EnsemblPlants:TraesCS5B01G198500.1 | EnsemblPlantsGene:TraesCS5B01G198500 | InterPro:DUF4228_plant | PANTHER:PTHR33413 | PANTHER:PTHR33413:SF7 | PFAM:PF14009 |
| SEG:seg | MapMan:35.2 | : | : | : | : |
Description
No Description!
Coordinates
chr5B:+:358375818..358376690
Molecular Weight (calculated)
21021.8 Da
IEP (calculated)
10.392
GRAVY (calculated)
-0.605
Length
200 amino acids
Sequence
(BLAST)
(BLAST)
001: MGNCQAAEAA EVIIQHPGGK VERLYWPTPA AEVMKTNPGH YVALVILRLS PDDKAAAGDE AAAAAAVAGA GAAAKITRVK LLKPKDVLHL GQVYRLITAQ
101: EVTKALRARK NDKMRRCEAI KQQHDQLRRG DGAEQGASDK DANANAKQRG EKDRHRGSGG AQPAGSGRGR HWRPSLQSIS EAAAGQSSSA SSSISESTAS
101: EVTKALRARK NDKMRRCEAI KQQHDQLRRG DGAEQGASDK DANANAKQRG EKDRHRGSGG AQPAGSGRGR HWRPSLQSIS EAAAGQSSSA SSSISESTAS
001: MGNCQAAEAA TTVIQQPDGK SVRFYCTVNA SEVIKSHPGH HVALLLSSAV PHGGSLRVTR IKLLRPSDNL LLGHVYRLIS SEEVMKGIRA KKSGKMKKIH
101: GEFSVAEEEI NPLTLRSESA SDKDTQRRIH EKQRGMMNTG GATNKVRAWQ PSLQSISEST S
101: GEFSVAEEEI NPLTLRSESA SDKDTQRRIH EKQRGMMNTG GATNKVRAWQ PSLQSISEST S
Arabidopsis Description
Basic-leucine zipper transcription factor K [Source:UniProtKB/TrEMBL;Acc:Q9FM06]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.