Skip to main content
crop-pal logo
Banana
Search for another protein from :
Banana
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • plastid 1
  • cytosol 3
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus, plastid
BaCelLo:nucleus
iPSORT:plastid
MultiLoc:cytosol
Plant-mPloc:nucleus
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
GSMUA_Achr10P...
GSMUA_Achr3P04120_001
GSMUA_Achr4P01630_001

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G60010.1 GSMUA_Achr10P... AT4G26455.1 21798944
AT1G60010.1 GSMUA_Achr3P04120_001 AT4G26455.1 21798944
AT1G60010.1 GSMUA_Achr4P01630_001 AT4G26455.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
GSMUA_Achr9P28200_001 Banana cytosol 65.93 71.86
GSMUA_Achr5P23980_001 Banana cytosol 53.85 71.53
GSMUA_Achr3P10380_001 Banana cytosol, nucleus, plastid 63.74 62.7
GSMUA_Achr3P06040_001 Banana cytosol 60.44 62.5
TraesCS7D01G194000.1 Wheat cytosol 48.9 54.94
KXG30786 Sorghum cytosol 48.35 52.38
TraesCS7B01G098100.1 Wheat cytosol 47.25 51.81
TraesCS7A01G192700.1 Wheat cytosol 47.25 51.5
Zm00001d017998_P001 Maize cytosol 48.35 50.87
Os02t0741700-01 Rice cytosol 45.6 50.0
KXG19676 Sorghum cytosol 47.25 49.43
EER96686 Sorghum cytosol 48.35 49.16
TraesCS6D01G288900.1 Wheat cytosol 48.35 48.89
TraesCS6B01G339300.1 Wheat cytosol 48.35 48.89
TraesCS6A01G309500.1 Wheat cytosol 47.8 48.33
Zm00001d052277_P001 Maize cytosol 44.51 48.21
Zm00001d020348_P001 Maize cytosol 47.8 47.28
Os08t0420700-01 Rice cytosol, nucleus, plastid 48.9 47.09
Os09t0381600-01 Rice cytosol 53.3 46.63
VIT_01s0026g00730.t01 Wine grape cytosol 44.51 46.29
Zm00001d032324_P001 Maize cytosol 46.7 45.7
Os06t0236300-01 Rice cytosol 46.7 44.97
TraesCS5A01G200100.1 Wheat cytosol 48.35 44.67
AT5G50090.1 Thale cress cytosol 39.01 44.65
TraesCS5B01G198500.1 Wheat cytosol 48.9 44.5
OQU80443 Sorghum cytosol 45.05 44.32
KRH69484 Soybean cytosol 41.76 44.19
TraesCS5B01G198400.1 Wheat cytosol 48.35 44.0
TraesCS5D01G205700.1 Wheat cytosol 48.35 44.0
Solyc06g071320.2.1 Tomato cytosol 37.36 43.87
HORVU7Hr1G039360.7 Barley cytosol 41.76 43.68
Zm00001d037251_P001 Maize cytosol 43.41 43.65
PGSC0003DMT400040233 Potato mitochondrion 39.56 43.64
HORVU6Hr1G076380.4 Barley cytosol 41.21 43.6
TraesCS2D01G082500.1 Wheat cytosol 46.7 43.59
KRH74672 Soybean cytosol 40.66 43.02
HORVU5Hr1G059690.7 Barley nucleus 47.8 42.86
HORVU7Hr1G039390.1 Barley cytosol 39.01 42.77
Solyc05g006030.2.1 Tomato cytosol 39.01 42.77
GSMUA_Achr9P18980_001 Banana nucleus 24.18 42.72
Bra010130.1-P Field mustard nucleus 37.36 42.5
CDX84364 Canola cytosol 37.36 42.5
CDY00334 Canola nucleus 37.36 42.5
KRH57030 Soybean cytosol 41.76 42.22
KRH45741 Soybean cytosol 40.66 42.05
PGSC0003DMT400063216 Potato cytosol 42.86 41.71
TraesCS2D01G082400.1 Wheat cytosol, mitochondrion, nucleus 45.6 41.71
AT1G60010.1 Thale cress cytosol 39.56 41.62
KRH63480 Soybean cytosol 39.56 41.62
AT5G62900.1 Thale cress cytosol 36.81 41.61
HORVU2Hr1G013820.4 Barley cytosol 46.15 41.58
TraesCS2A01G084400.1 Wheat cytosol 45.6 41.5
TraesCS2A01G084700.1 Wheat cytosol 45.6 41.5
TraesCS2A01G084500.1 Wheat cytosol 46.7 41.46
TraesCS2A01G084600.1 Wheat cytosol 45.05 41.41
Bra000609.1-P Field mustard cytosol 35.71 41.4
CDY21433 Canola cytosol 35.71 41.4
KRG99257 Soybean cytosol 39.56 41.38
TraesCS2D01G082600.1 Wheat cytosol 45.6 41.09
TraesCS2B01G099100.1 Wheat nucleus 45.05 41.0
Zm00001d044783_P001 Maize cytosol 39.01 40.8
KRH03351 Soybean cytosol 40.66 40.66
TraesCS2B01G099200.1 Wheat nucleus 44.51 40.5
TraesCS2D01G082300.1 Wheat cytosol 44.51 40.5
PGSC0003DMT400083024 Potato cytosol 35.71 40.37
AT1G10530.1 Thale cress cytosol, mitochondrion, nucleus, plastid 36.81 40.36
TraesCS2B01G099400.1 Wheat cytosol 44.51 40.1
VIT_17s0000g07840.t01 Wine grape cytosol 40.11 39.67
Bra035410.1-P Field mustard cytosol 37.91 39.43
CDY24507 Canola cytosol 37.91 39.43
KRH54436 Soybean cytosol 39.01 39.23
CDY69854 Canola cytosol 37.91 39.2
Bra035874.1-P Field mustard cytosol 35.71 38.92
Solyc03g114020.2.1 Tomato cytosol 39.56 38.5
CDY30923 Canola cytosol 37.36 38.42
CDY07805 Canola nucleus 34.62 37.95
Bra027820.1-P Field mustard cytosol 36.81 37.85
CDY70563 Canola cytosol 36.81 37.43
Bra031717.1-P Field mustard cytosol 34.07 37.35
CDY34887 Canola cytosol 33.52 36.75
CDX87268 Canola cytosol 31.32 35.62
GSMUA_Achr7P26140_001 Banana cytosol 30.22 31.43
TraesCS2B01G098900.1 Wheat nucleus, plastid 30.22 30.39
GSMUA_Achr8P31090_001 Banana cytosol 34.07 29.81
GSMUA_Achr6P24780_001 Banana cytosol 32.42 29.8
GSMUA_Achr1P22560_001 Banana cytosol 32.97 29.7
GSMUA_Achr7P26120_001 Banana cytosol 28.02 25.5
Protein Annotations
EnsemblPlants:GSMUA_Achr9P18270_001EnsemblPlants:GSMUA_Achr9T18270_001EnsemblPlantsGene:GSMUA_Achr9G18270_001InterPro:DUF4228_plantPANTHER:PTHR33413PANTHER:PTHR33413:SF5
PFAM:PF14009SEG:segUniParc:UPI000296E3E3UniProt:M0U1D4MapMan:35.2:
Description
expressed protein [Source:GMGC_GENE;Acc:GSMUA_Achr9G18270_001]
Coordinates
chr9:-:12808356..12809404
Molecular Weight (calculated)
20415.0 Da
IEP (calculated)
10.076
GRAVY (calculated)
-0.960
Length
182 amino acids
Sequence
(BLAST)
001: MGNCQAAEVA TVVIQHPGGR VERLYWPTSA ADVMKSNPGY HVALVTLYVS ETKTDGGGGG AGTVRFTRVR LLKPRDMLLL GQVYRLITSQ EVAKALRQRK
101: YEKLKKTQAE SIRKQQQQQQ QQQQHGTNDQ CTDPAREETE EDSDATHQAT NQERDRQKSR TQVAARGRHW RPSLQSISEA GS
Best Arabidopsis Sequence Match ( AT1G60010.1 )
(BLAST)
001: MGNCQAVDAA ALVLQHPDGK IDRYYGPVSV SEIMRMYPGH YVSLIIPLPE KNIPATTTTT DDKSERKVVR FTRVKLLRPT ENLVLGHAYR LITSQEVMKV
101: LRAKKYAKTK KHQSETSKEK KKPSSEKKID EESDKNQNLE TKDEKQRSVL TNSASSRSKT WRPSLQSISE ATS
Arabidopsis Description
D-ribose-binding periplasmic protein [Source:UniProtKB/TrEMBL;Acc:Q9ZUJ2]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.