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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • plastid 2
  • nucleus 1
  • mitochondrion 2
  • cytosol 2
PPI

Inferred distinct locusB in Crop

Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY07805 Canola nucleus 97.59 97.59
Bra031717.1-P Field mustard cytosol 96.39 96.39
AT1G10530.1 Thale cress cytosol, mitochondrion, nucleus, plastid 77.11 77.11
CDY24507 Canola cytosol 57.23 54.29
CDY30923 Canola cytosol 56.63 53.11
CDY69854 Canola cytosol 56.02 52.84
CDY70563 Canola cytosol 56.63 52.51
PGSC0003DMT400040233 Potato mitochondrion 50.0 50.3
Solyc05g006030.2.1 Tomato cytosol 49.4 49.4
VIT_01s0026g00730.t01 Wine grape cytosol 50.0 47.43
KRH69484 Soybean cytosol 48.8 47.09
KRH74672 Soybean cytosol 48.19 46.51
KRG99257 Soybean cytosol 46.99 44.83
KRH45741 Soybean cytosol 46.99 44.32
GSMUA_Achr5P23980_001 Banana cytosol 33.13 40.15
CDY00334 Canola nucleus 37.95 39.38
CDX84364 Canola cytosol 37.95 39.38
KXG30786 Sorghum cytosol 39.76 39.29
CDY21433 Canola cytosol 35.54 37.58
GSMUA_Achr3P06040_001 Banana cytosol 39.76 37.5
GSMUA_Achr9P28200_001 Banana cytosol 36.14 35.93
Zm00001d017998_P001 Maize cytosol 36.75 35.26
TraesCS7D01G194000.1 Wheat cytosol 34.34 35.19
TraesCS7B01G098100.1 Wheat cytosol 34.94 34.94
TraesCS7A01G192700.1 Wheat cytosol 34.94 34.73
EER96686 Sorghum cytosol 37.35 34.64
Zm00001d052277_P001 Maize cytosol 34.94 34.52
KXG19676 Sorghum cytosol 36.14 34.48
TraesCS6A01G309500.1 Wheat cytosol 37.35 34.44
CDX87268 Canola cytosol 32.53 33.75
GSMUA_Achr9P18270_001 Banana cytosol 36.75 33.52
TraesCS6D01G288900.1 Wheat cytosol 36.14 33.33
TraesCS6B01G339300.1 Wheat cytosol 36.14 33.33
Os02t0741700-01 Rice cytosol 33.13 33.13
Zm00001d020348_P001 Maize cytosol 36.14 32.61
Zm00001d037251_P001 Maize cytosol 35.54 32.6
HORVU6Hr1G076380.4 Barley cytosol 33.73 32.56
OQU80443 Sorghum cytosol 36.14 32.43
GSMUA_Achr3P10380_001 Banana cytosol, nucleus, plastid 36.14 32.43
TraesCS5A01G200100.1 Wheat cytosol 37.95 31.98
Os06t0236300-01 Rice cytosol 36.14 31.75
TraesCS5D01G205700.1 Wheat cytosol 37.95 31.5
TraesCS5B01G198500.1 Wheat cytosol 37.95 31.5
Os09t0381600-01 Rice cytosol 39.16 31.25
Zm00001d032324_P001 Maize cytosol 34.94 31.18
Zm00001d044783_P001 Maize cytosol 32.53 31.03
HORVU5Hr1G059690.7 Barley nucleus 37.95 31.03
TraesCS5B01G198400.1 Wheat cytosol 37.35 31.0
HORVU7Hr1G039390.1 Barley cytosol 28.92 28.92
Os08t0420700-01 Rice cytosol, nucleus, plastid 32.53 28.57
CDY18668 Canola nucleus 30.72 28.49
CDY43585 Canola nucleus 30.12 28.41
CDY37844 Canola nucleus 30.12 27.93
TraesCS2A01G084600.1 Wheat cytosol 33.13 27.78
CDX81304 Canola nucleus 30.72 27.72
HORVU7Hr1G039360.7 Barley cytosol 28.92 27.59
TraesCS2A01G084700.1 Wheat cytosol 33.13 27.5
TraesCS2D01G082600.1 Wheat cytosol 33.13 27.23
TraesCS2B01G099400.1 Wheat cytosol 33.13 27.23
HORVU2Hr1G013820.4 Barley cytosol 33.13 27.23
TraesCS2D01G082500.1 Wheat cytosol 31.93 27.18
TraesCS2D01G082400.1 Wheat cytosol, mitochondrion, nucleus 32.53 27.14
TraesCS2D01G082300.1 Wheat cytosol 32.53 27.0
TraesCS2B01G099200.1 Wheat nucleus 31.33 26.0
TraesCS2A01G084500.1 Wheat cytosol 31.93 25.85
TraesCS2B01G099100.1 Wheat nucleus 30.72 25.5
TraesCS2A01G084400.1 Wheat cytosol 30.72 25.5
CDY08733 Canola nucleus 25.3 25.45
CDY36508 Canola nucleus 24.7 24.85
TraesCS2B01G098900.1 Wheat nucleus, plastid 20.48 18.78
Protein Annotations
EnsemblPlants:CDY34887EnsemblPlantsGene:GSBRNA2T00057452001InterPro:DUF4228_plantPANTHER:PTHR33413PANTHER:PTHR33413:SF4PFAM:PF14009
ProteinID:CDY34887ProteinID:CDY34887.1UniParc:UPI0004EF3765UniProt:A0A078HAT8MapMan:35.2:
Description
BnaA09g48130DBnaA09g48130D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HAT8]
Coordinates
chrLK032342:+:327112..327988
Molecular Weight (calculated)
18727.0 Da
IEP (calculated)
10.503
GRAVY (calculated)
-0.501
Length
166 amino acids
Sequence
(BLAST)
001: MGNCQTINAA ALVLQHPGGK IDRYYSSISV SEIMSMYPGH YVCLIIPLTE EEEKNIPATV KRDEKKHKKG VRFTRVQLLR PTESLALGHA YRLITSQEVM
101: KVLREKKCAK TKKHHADAMI TVKKLLEKNV PEKKQGKQHR VLTSSASFLK SKAWKPSLQS ISEATS
Best Arabidopsis Sequence Match ( AT1G10530.1 )
(BLAST)
001: MGNCQAVNAA VLVLQHPGGI IDRYYSSVSV TEVMAMYPGH YVSLIIPLSE EEEKNIPATE KGDDKKQRKA VRFTRVQLLR PTENLVLGHA YRLITSQEVM
101: KVLREKKSAK TKKHQIEKTT TAKKFSDKKV PEKKQGKQFR VIRNSTSLLK SKTWRPSLQS ISEATS
Arabidopsis Description
At1g10530 [Source:UniProtKB/TrEMBL;Acc:Q7XJ59]
SUBAcon: [mitochondrion,plastid,nucleus,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.