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Banana
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Banana
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol, nucleus, plastid

Predictor Summary:
  • nucleus 3
  • plastid 2
  • cytosol 1
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, nucleus, plastid
Any Predictor:cytosol, mitochondrion, nucleus, plastid
BaCelLo:nucleus
iPSORT:plastid
MultiLoc:cytosol
Plant-mPloc:nucleus
PProwler:mitochondrion
WoLF PSORT:plastid
YLoc:nucleus
PPI

Inferred distinct locusB in Crop

locusBlocations
GSMUA_Achr10P...
GSMUA_Achr3P04120_001
GSMUA_Achr4P01630_001

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G60010.1 GSMUA_Achr10P... AT4G26455.1 21798944
AT1G60010.1 GSMUA_Achr3P04120_001 AT4G26455.1 21798944
AT1G60010.1 GSMUA_Achr4P01630_001 AT4G26455.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
GSMUA_Achr5P23980_001 Banana cytosol 48.65 65.69
GSMUA_Achr9P28200_001 Banana cytosol 58.38 64.67
GSMUA_Achr9P18270_001 Banana cytosol 62.7 63.74
GSMUA_Achr3P06040_001 Banana cytosol 49.73 52.27
KXG30786 Sorghum cytosol 46.49 51.19
Zm00001d017998_P001 Maize cytosol 46.49 49.71
KXG19676 Sorghum cytosol 45.41 48.28
TraesCS7D01G194000.1 Wheat cytosol 42.16 48.15
TraesCS6A01G309500.1 Wheat cytosol 46.49 47.78
TraesCS6B01G339300.1 Wheat cytosol 46.49 47.78
TraesCS6D01G288900.1 Wheat cytosol 46.49 47.78
Zm00001d020348_P001 Maize cytosol 47.03 47.28
Zm00001d052277_P001 Maize cytosol 42.7 47.02
TraesCS7B01G098100.1 Wheat cytosol 42.16 46.99
Os02t0741700-01 Rice cytosol 42.16 46.99
EER96686 Sorghum cytosol 45.41 46.93
TraesCS7A01G192700.1 Wheat cytosol 42.16 46.71
HORVU6Hr1G076380.4 Barley cytosol 42.16 45.35
OQU80443 Sorghum cytosol 44.86 44.86
TraesCS5A01G200100.1 Wheat cytosol 47.57 44.67
TraesCS5B01G198500.1 Wheat cytosol 48.11 44.5
Os09t0381600-01 Rice cytosol 49.73 44.23
GSMUA_Achr9P18980_001 Banana nucleus 24.32 43.69
Zm00001d037251_P001 Maize cytosol 42.7 43.65
TraesCS5D01G205700.1 Wheat cytosol 47.03 43.5
TraesCS5B01G198400.1 Wheat cytosol 47.03 43.5
HORVU5Hr1G059690.7 Barley nucleus 47.57 43.35
VIT_01s0026g00730.t01 Wine grape cytosol 40.54 42.86
AT5G50090.1 Thale cress cytosol 36.76 42.77
Zm00001d032324_P001 Maize cytosol 42.7 42.47
KRH69484 Soybean cytosol 39.46 42.44
PGSC0003DMT400040233 Potato mitochondrion 37.84 42.42
Os08t0420700-01 Rice cytosol, nucleus, plastid 43.24 42.33
Os06t0236300-01 Rice cytosol 43.24 42.33
Solyc05g006030.2.1 Tomato cytosol 37.84 42.17
HORVU7Hr1G039360.7 Barley cytosol 39.46 41.95
TraesCS2A01G084600.1 Wheat cytosol 44.32 41.41
Bra010130.1-P Field mustard nucleus 35.68 41.25
CDY00334 Canola nucleus 35.68 41.25
CDX84364 Canola cytosol 35.68 41.25
Zm00001d044783_P001 Maize cytosol 38.38 40.8
CDY21433 Canola cytosol 34.59 40.76
TraesCS2D01G082400.1 Wheat cytosol, mitochondrion, nucleus 43.78 40.7
KRH74672 Soybean cytosol 37.84 40.7
PGSC0003DMT400063216 Potato cytosol 41.08 40.64
KRH57030 Soybean cytosol 39.46 40.56
TraesCS2D01G082300.1 Wheat cytosol 43.78 40.5
TraesCS2B01G099200.1 Wheat nucleus 43.78 40.5
TraesCS2B01G099100.1 Wheat nucleus 43.78 40.5
KRH63480 Soybean cytosol 37.84 40.46
HORVU7Hr1G039390.1 Barley cytosol 36.22 40.36
Bra000609.1-P Field mustard cytosol 34.05 40.13
KRH03351 Soybean cytosol 39.46 40.11
TraesCS2A01G084400.1 Wheat cytosol 43.24 40.0
TraesCS2A01G084700.1 Wheat cytosol 43.24 40.0
AT1G10530.1 Thale cress cytosol, mitochondrion, nucleus, plastid 35.68 39.76
VIT_17s0000g07840.t01 Wine grape cytosol 39.46 39.67
TraesCS2B01G099400.1 Wheat cytosol 43.24 39.6
TraesCS2A01G084500.1 Wheat cytosol 43.78 39.51
Solyc06g071320.2.1 Tomato cytosol 32.97 39.35
KRG99257 Soybean cytosol 36.76 39.08
TraesCS2D01G082500.1 Wheat cytosol 41.08 38.97
KRH54436 Soybean cytosol 37.84 38.67
KRH45741 Soybean cytosol 36.76 38.64
TraesCS2D01G082600.1 Wheat cytosol 42.16 38.61
HORVU2Hr1G013820.4 Barley cytosol 42.16 38.61
AT5G62900.1 Thale cress cytosol 33.51 38.51
Solyc03g114020.2.1 Tomato cytosol 38.38 37.97
CDY69854 Canola cytosol 35.68 37.5
CDY07805 Canola nucleus 33.51 37.35
PGSC0003DMT400083024 Potato cytosol 32.43 37.27
Bra031717.1-P Field mustard cytosol 32.97 36.75
Bra035410.1-P Field mustard cytosol 34.59 36.57
CDY24507 Canola cytosol 34.59 36.57
Bra035874.1-P Field mustard cytosol 32.97 36.53
AT1G60010.1 Thale cress cytosol 34.05 36.42
CDY34887 Canola cytosol 32.43 36.14
CDY30923 Canola cytosol 32.97 34.46
Bra027820.1-P Field mustard cytosol 32.97 34.46
CDY70563 Canola cytosol 32.97 34.08
CDX87268 Canola cytosol 27.57 31.88
GSMUA_Achr6P24780_001 Banana cytosol 34.05 31.82
GSMUA_Achr8P31090_001 Banana cytosol 35.68 31.73
GSMUA_Achr7P26140_001 Banana cytosol 29.73 31.43
GSMUA_Achr7P26120_001 Banana cytosol 31.89 29.5
TraesCS2B01G098900.1 Wheat nucleus, plastid 28.65 29.28
GSMUA_Achr1P22560_001 Banana cytosol 31.89 29.21
Protein Annotations
EnsemblPlants:GSMUA_Achr3P10380_001EnsemblPlants:GSMUA_Achr3T10380_001EnsemblPlantsGene:GSMUA_Achr3G10380_001InterPro:DUF4228_plantncoils:CoilPANTHER:PTHR33413
PANTHER:PTHR33413:SF7PFAM:PF14009SEG:segUniParc:UPI000294A097UniProt:M0SDF5MapMan:35.2
Description
expressed protein [Source:GMGC_GENE;Acc:GSMUA_Achr3G10380_001]
Coordinates
chr3:-:7527582..7528562
Molecular Weight (calculated)
20654.5 Da
IEP (calculated)
9.881
GRAVY (calculated)
-0.755
Length
185 amino acids
Sequence
(BLAST)
001: MGNCQASEAA TAVIQHPGGR VERLYWPTSA AAVMKSNPGY YVALVTLYVS EEKQDGSGGN VRITRVRLLK PKDMLLLGQV YRLITSQEVT KALNQRKHEK
101: LKKTQAELIR KQQQGEQQQR RNDQGCDAVP QETQEVSEDA HQVHSICLCS AATKQERDRP KSSTQTATRG RHWRPSLGSI SEVVS
Best Arabidopsis Sequence Match ( AT1G60010.1 )
(BLAST)
001: MGNCQAVDAA ALVLQHPDGK IDRYYGPVSV SEIMRMYPGH YVSLIIPLPE KNIPATTTTT DDKSERKVVR FTRVKLLRPT ENLVLGHAYR LITSQEVMKV
101: LRAKKYAKTK KHQSETSKEK KKPSSEKKID EESDKNQNLE TKDEKQRSVL TNSASSRSKT WRPSLQSISE ATS
Arabidopsis Description
D-ribose-binding periplasmic protein [Source:UniProtKB/TrEMBL;Acc:Q9ZUJ2]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.