CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
plastid 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH54436	Soybean	cytosol	89.02	85.08
KRH57030	Soybean	cytosol	60.12	57.78
KRH03351	Soybean	cytosol	59.54	56.59
VIT_17s0000g07840.t01	Wine grape	cytosol	57.8	54.35
AT5G50090.1	Thale cress	cytosol	47.98	52.2
Solyc06g071320.2.1	Tomato	cytosol	46.24	51.61
Bra000609.1-P	Field mustard	cytosol	45.09	49.68
PGSC0003DMT400083024	Potato	cytosol	45.09	48.45
CDY21433	Canola	cytosol	43.35	47.77
PGSC0003DMT400063216	Potato	cytosol	51.45	47.59
Solyc03g114020.2.1	Tomato	cytosol	50.87	47.06
GSMUA_Achr5P23980_001	Banana	cytosol	36.99	46.72
KRG99257	Soybean	cytosol	45.66	45.4
CDY00334	Canola	nucleus	41.62	45.0
CDX84364	Canola	cytosol	41.62	45.0
Bra010130.1-P	Field mustard	nucleus	41.62	45.0
KRH45741	Soybean	cytosol	45.66	44.89
KRH69484	Soybean	cytosol	44.51	44.77
AT5G62900.1	Thale cress	cytosol	41.62	44.72
KRH74672	Soybean	cytosol	43.35	43.6
GSMUA_Achr9P28200_001	Banana	cytosol	41.62	43.11
Bra035874.1-P	Field mustard	cytosol	39.31	40.72
KXG30786	Sorghum	cytosol	38.73	39.88
GSMUA_Achr9P18270_001	Banana	cytosol	41.62	39.56
OQU80443	Sorghum	cytosol	42.2	39.46
Zm00001d017998_P001	Maize	cytosol	39.31	39.31
GSMUA_Achr3P06040_001	Banana	cytosol	39.88	39.2
Zm00001d032324_P001	Maize	cytosol	41.62	38.71
TraesCS5A01G200100.1	Wheat	cytosol	43.93	38.58
EER96686	Sorghum	cytosol	39.88	38.55
CDX87268	Canola	cytosol	35.26	38.12
TraesCS7B01G098100.1	Wheat	cytosol	36.42	37.95
KXG19676	Sorghum	cytosol	38.15	37.93
GSMUA_Achr3P10380_001	Banana	cytosol, nucleus, plastid	40.46	37.84
TraesCS7A01G192700.1	Wheat	cytosol	36.42	37.72
TraesCS7D01G194000.1	Wheat	cytosol	35.26	37.65
Zm00001d037251_P001	Maize	cytosol	39.31	37.57
Zm00001d020348_P001	Maize	cytosol	39.31	36.96
HORVU5Hr1G059690.7	Barley	nucleus	43.35	36.95
Os09t0381600-01	Rice	cytosol	43.93	36.54
TraesCS5B01G198500.1	Wheat	cytosol	42.2	36.5
TraesCS5D01G205700.1	Wheat	cytosol	41.62	36.0
TraesCS5B01G198400.1	Wheat	cytosol	41.62	36.0
Zm00001d052277_P001	Maize	cytosol	34.68	35.71
Os08t0420700-01	Rice	cytosol, nucleus, plastid	38.73	35.45
TraesCS2D01G082500.1	Wheat	cytosol	39.88	35.38
TraesCS6D01G288900.1	Wheat	cytosol	36.42	35.0
TraesCS6B01G339300.1	Wheat	cytosol	36.42	35.0
Os06t0236300-01	Rice	cytosol	37.57	34.39
Os02t0741700-01	Rice	cytosol	32.95	34.34
TraesCS6A01G309500.1	Wheat	cytosol	35.26	33.89
TraesCS2A01G084600.1	Wheat	cytosol	38.73	33.84
TraesCS2B01G099400.1	Wheat	cytosol	38.73	33.17
TraesCS2B01G099100.1	Wheat	nucleus	38.15	33.0
TraesCS2A01G084400.1	Wheat	cytosol	38.15	33.0
TraesCS2D01G082300.1	Wheat	cytosol	38.15	33.0
KRH58136	Soybean	nucleus	34.1	32.78
Zm00001d044783_P001	Maize	cytosol	32.95	32.76
TraesCS2A01G084500.1	Wheat	cytosol	38.73	32.68
TraesCS2D01G082600.1	Wheat	cytosol	38.15	32.67
HORVU2Hr1G013820.4	Barley	cytosol	38.15	32.67
TraesCS2D01G082400.1	Wheat	cytosol, mitochondrion, nucleus	37.57	32.66
KRH04405	Soybean	cytosol	33.53	32.58
HORVU6Hr1G076380.4	Barley	cytosol	32.37	32.56
TraesCS2A01G084700.1	Wheat	cytosol	37.57	32.5
TraesCS2B01G099200.1	Wheat	nucleus	37.57	32.5
HORVU7Hr1G039360.7	Barley	cytosol	32.37	32.18
HORVU7Hr1G039390.1	Barley	cytosol	30.06	31.33
TraesCS2B01G098900.1	Wheat	nucleus, plastid	24.28	23.2

Protein Annotations

EMBL:ACUP02002694	EMBL:BT092446	EnsemblPlants:KRH63480	EnsemblPlantsGene:GLYMA_04G179900	EntrezGene:100527592	InterPro:DUF4228_plant
PANTHER:PTHR33413	PANTHER:PTHR33413:SF5	PFAM:PF14009	ProteinID:KRH63480	ProteinID:KRH63480.1	SEG:seg
UniParc:UPI0001B14EB7	UniProt:C6T4T5	MapMan:35.2	:	:	:

Description

hypothetical protein

Coordinates

chr4:-:44488007..44489859

Molecular Weight (calculated)

19244.3 Da

IEP (calculated)

10.476

GRAVY (calculated)

-0.508

Length

173 amino acids

Sequence
(BLAST)

001: MGNCQAIDAA TLVIQHTNGK VDKFYAPLSA THVMKTNPGH YVALLISTTL CPTKDIQNCS NANNPVRITR IKLLKPTDTL VLGQVYRLIT TQEVMKGLRE
101: KQKAKMRQNV PESALKLELE KEKVARRSEM EDNKAITNPE RARPRITATT NNGATAKTRF WQPSLQSISE AAS

Best Arabidopsis Sequence Match ( AT5G50090.1 )
(BLAST)

001: MGNCQAVDTA RVVIQHPNGK EEKLSCPVSA SYVMKMNPGH CVSLLISTTA LSSASSGHGG PLRLTRIKLL RPTDTLVLGH VYRLITTKEV MKGLMAKKCS
101: KLKKESKGSD DKLEMVKAIN STKLDNEDQL QMKKQEKERS RISRSWQPSL QSISEGGSS

Arabidopsis Description

At5g50090 [Source:UniProtKB/TrEMBL;Acc:Q9FGA2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.