CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
plastid 1
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH03351	Soybean	cytosol	94.44	93.41
KRH63480	Soybean	cytosol	57.78	60.12
KRH54436	Soybean	cytosol	57.22	56.91
AT5G50090.1	Thale cress	cytosol	47.22	53.46
VIT_17s0000g07840.t01	Wine grape	cytosol	52.78	51.63
KRH69484	Soybean	cytosol	48.33	50.58
Bra000609.1-P	Field mustard	cytosol	43.89	50.32
CDY21433	Canola	cytosol	43.33	49.68
Bra010130.1-P	Field mustard	nucleus	43.89	49.38
CDY00334	Canola	nucleus	43.89	49.38
GSMUA_Achr5P23980_001	Banana	cytosol	37.22	48.91
CDX84364	Canola	cytosol	43.33	48.75
PGSC0003DMT400063216	Potato	cytosol	50.56	48.66
PGSC0003DMT400083024	Potato	cytosol	43.33	48.45
Solyc06g071320.2.1	Tomato	cytosol	41.67	48.39
KRH74672	Soybean	cytosol	46.11	48.26
Solyc03g114020.2.1	Tomato	cytosol	50.0	48.13
AT5G62900.1	Thale cress	cytosol	41.67	46.58
KRG99257	Soybean	cytosol	45.0	46.55
KRH45741	Soybean	cytosol	45.0	46.02
GSMUA_Achr9P28200_001	Banana	cytosol	40.56	43.71
Bra035874.1-P	Field mustard	cytosol	40.0	43.11
GSMUA_Achr3P06040_001	Banana	cytosol	41.11	42.05
GSMUA_Achr9P18270_001	Banana	cytosol	42.22	41.76
TraesCS7D01G194000.1	Wheat	cytosol	37.22	41.36
KXG30786	Sorghum	cytosol	38.33	41.07
EER96686	Sorghum	cytosol	40.56	40.78
TraesCS5B01G198500.1	Wheat	cytosol	45.0	40.5
Zm00001d017998_P001	Maize	cytosol	38.89	40.46
TraesCS5A01G200100.1	Wheat	cytosol	43.89	40.1
TraesCS5B01G198400.1	Wheat	cytosol	44.44	40.0
TraesCS5D01G205700.1	Wheat	cytosol	44.44	40.0
Zm00001d020348_P001	Maize	cytosol	40.56	39.67
KXG19676	Sorghum	cytosol	38.33	39.66
OQU80443	Sorghum	cytosol	40.56	39.46
GSMUA_Achr3P10380_001	Banana	cytosol, nucleus, plastid	40.56	39.46
Os09t0381600-01	Rice	cytosol	45.56	39.42
TraesCS7B01G098100.1	Wheat	cytosol	36.11	39.16
TraesCS7A01G192700.1	Wheat	cytosol	36.11	38.92
HORVU5Hr1G059690.7	Barley	nucleus	43.89	38.92
CDX87268	Canola	cytosol	34.44	38.75
Zm00001d037251_P001	Maize	cytosol	38.89	38.67
TraesCS6B01G339300.1	Wheat	cytosol	38.33	38.33
TraesCS6D01G288900.1	Wheat	cytosol	38.33	38.33
Os08t0420700-01	Rice	cytosol, nucleus, plastid	40.0	38.1
KRH58136	Soybean	nucleus	37.22	37.22
Zm00001d032324_P001	Maize	cytosol	38.33	37.1
TraesCS6A01G309500.1	Wheat	cytosol	36.67	36.67
Os06t0236300-01	Rice	cytosol	37.22	35.45
TraesCS2D01G082500.1	Wheat	cytosol	38.33	35.38
TraesCS2A01G084600.1	Wheat	cytosol	38.33	34.85
KRH04405	Soybean	cytosol	34.44	34.83
TraesCS2A01G084700.1	Wheat	cytosol	38.33	34.5
Os02t0741700-01	Rice	cytosol	31.67	34.34
TraesCS2D01G082400.1	Wheat	cytosol, mitochondrion, nucleus	37.78	34.17
TraesCS2A01G084400.1	Wheat	cytosol	37.78	34.0
Zm00001d052277_P001	Maize	cytosol	31.67	33.93
HORVU7Hr1G039390.1	Barley	cytosol	31.11	33.73
HORVU6Hr1G076380.4	Barley	cytosol	32.22	33.72
TraesCS2D01G082600.1	Wheat	cytosol	37.78	33.66
TraesCS2B01G099400.1	Wheat	cytosol	37.78	33.66
TraesCS2A01G084500.1	Wheat	cytosol	38.33	33.66
TraesCS2D01G082300.1	Wheat	cytosol	37.22	33.5
TraesCS2B01G099100.1	Wheat	nucleus	37.22	33.5
HORVU2Hr1G013820.4	Barley	cytosol	37.22	33.17
TraesCS2B01G099200.1	Wheat	nucleus	36.67	33.0
HORVU7Hr1G039360.7	Barley	cytosol	31.67	32.76
Zm00001d044783_P001	Maize	cytosol	31.67	32.76
TraesCS2B01G098900.1	Wheat	nucleus, plastid	26.67	26.52

Protein Annotations

EMBL:ACUP02002807	EMBL:BT091435	EnsemblPlants:KRH57030	EnsemblPlantsGene:GLYMA_05G034800	EntrezGene:100500500	InterPro:DUF4228_plant
PANTHER:PTHR33413	PANTHER:PTHR33413:SF5	PFAM:PF14009	ProteinID:KRH57030	ProteinID:KRH57030.1	SEG:seg
UniParc:UPI0001B14DB7	UniProt:C6T1X9	MapMan:35.2	:	:	:

Description

hypothetical protein

Coordinates

chr5:-:3052781..3054541

Molecular Weight (calculated)

20059.7 Da

IEP (calculated)

10.086

GRAVY (calculated)

-0.841

Length

180 amino acids

Sequence
(BLAST)

001: MGNCQAVDTA TLVIQQPNGK VERLYWPVSA SEVMKTNPDH YVALLISTTL CSSKDNENCS SKSDNTTNPV RLTRIKLLKP TDTLMLGQVY RLISAQEVMK
101: GLWEKKQAKM KRNLSESAQK PNLMKERTDK STRRSEPEDN QETKAERHGS RTASTNNASS ATAKSRTWQP SLQSISEAAS

Best Arabidopsis Sequence Match ( AT5G50090.1 )
(BLAST)

001: MGNCQAVDTA RVVIQHPNGK EEKLSCPVSA SYVMKMNPGH CVSLLISTTA LSSASSGHGG PLRLTRIKLL RPTDTLVLGH VYRLITTKEV MKGLMAKKCS
101: KLKKESKGSD DKLEMVKAIN STKLDNEDQL QMKKQEKERS RISRSWQPSL QSISEGGSS

Arabidopsis Description

At5g50090 [Source:UniProtKB/TrEMBL;Acc:Q9FGA2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.