Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY21433 | Canola | cytosol | 79.25 | 80.25 |
| Bra000609.1-P | Field mustard | cytosol | 77.99 | 78.98 |
| KRH63480 | Soybean | cytosol | 52.2 | 47.98 |
| KRH57030 | Soybean | cytosol | 53.46 | 47.22 |
| GSMUA_Achr5P23980_001 | Banana | cytosol | 40.25 | 46.72 |
| KRH03351 | Soybean | cytosol | 53.46 | 46.7 |
| Solyc06g071320.2.1 | Tomato | cytosol | 44.65 | 45.81 |
| PGSC0003DMT400083024 | Potato | cytosol | 45.91 | 45.34 |
| VIT_17s0000g07840.t01 | Wine grape | cytosol | 52.2 | 45.11 |
| KRH54436 | Soybean | cytosol | 50.94 | 44.75 |
| AT5G62900.1 | Thale cress | cytosol | 44.03 | 43.48 |
| Solyc03g114020.2.1 | Tomato | cytosol | 49.06 | 41.71 |
| PGSC0003DMT400063216 | Potato | cytosol | 49.06 | 41.71 |
| AT1G60010.1 | Thale cress | cytosol | 43.4 | 39.88 |
| AT1G10530.1 | Thale cress | cytosol, mitochondrion, nucleus, plastid | 41.51 | 39.76 |
| GSMUA_Achr3P06040_001 | Banana | cytosol | 43.4 | 39.2 |
| GSMUA_Achr9P18270_001 | Banana | cytosol | 44.65 | 39.01 |
| GSMUA_Achr9P28200_001 | Banana | cytosol | 40.88 | 38.92 |
| KXG30786 | Sorghum | cytosol | 40.25 | 38.1 |
| TraesCS7B01G098100.1 | Wheat | cytosol | 39.62 | 37.95 |
| TraesCS7A01G192700.1 | Wheat | cytosol | 39.62 | 37.72 |
| TraesCS7D01G194000.1 | Wheat | cytosol | 38.36 | 37.65 |
| Zm00001d017998_P001 | Maize | cytosol | 40.25 | 36.99 |
| GSMUA_Achr3P10380_001 | Banana | cytosol, nucleus, plastid | 42.77 | 36.76 |
| EER96686 | Sorghum | cytosol | 40.88 | 36.31 |
| TraesCS6B01G339300.1 | Wheat | cytosol | 40.88 | 36.11 |
| TraesCS6D01G288900.1 | Wheat | cytosol | 40.88 | 36.11 |
| OQU80443 | Sorghum | cytosol | 41.51 | 35.68 |
| KXG19676 | Sorghum | cytosol | 38.99 | 35.63 |
| TraesCS6A01G309500.1 | Wheat | cytosol | 38.99 | 34.44 |
| Zm00001d037251_P001 | Maize | cytosol | 38.36 | 33.7 |
| Zm00001d020348_P001 | Maize | cytosol | 38.99 | 33.7 |
| Zm00001d052277_P001 | Maize | cytosol | 35.22 | 33.33 |
| Os08t0420700-01 | Rice | cytosol, nucleus, plastid | 38.99 | 32.8 |
| Zm00001d032324_P001 | Maize | cytosol | 38.36 | 32.8 |
| Os09t0381600-01 | Rice | cytosol | 42.77 | 32.69 |
| HORVU6Hr1G076380.4 | Barley | cytosol | 35.22 | 32.56 |
| Os02t0741700-01 | Rice | cytosol | 33.96 | 32.53 |
| TraesCS2D01G082300.1 | Wheat | cytosol | 40.88 | 32.5 |
| TraesCS5A01G200100.1 | Wheat | cytosol | 40.25 | 32.49 |
| TraesCS2D01G082400.1 | Wheat | cytosol, mitochondrion, nucleus | 40.25 | 32.16 |
| TraesCS2B01G099100.1 | Wheat | nucleus | 40.25 | 32.0 |
| TraesCS5B01G198500.1 | Wheat | cytosol | 40.25 | 32.0 |
| TraesCS2A01G084700.1 | Wheat | cytosol | 40.25 | 32.0 |
| AT5G67620.1 | Thale cress | nucleus | 36.48 | 31.87 |
| TraesCS2A01G084600.1 | Wheat | cytosol | 39.62 | 31.82 |
| Os06t0236300-01 | Rice | cytosol | 37.74 | 31.75 |
| TraesCS2A01G084500.1 | Wheat | cytosol | 40.88 | 31.71 |
| Zm00001d044783_P001 | Maize | cytosol | 34.59 | 31.61 |
| HORVU5Hr1G059690.7 | Barley | nucleus | 40.25 | 31.53 |
| TraesCS5B01G198400.1 | Wheat | cytosol | 39.62 | 31.5 |
| TraesCS5D01G205700.1 | Wheat | cytosol | 39.62 | 31.5 |
| TraesCS2B01G099200.1 | Wheat | nucleus | 39.62 | 31.5 |
| TraesCS2A01G084400.1 | Wheat | cytosol | 39.62 | 31.5 |
| HORVU7Hr1G039390.1 | Barley | cytosol | 32.7 | 31.33 |
| TraesCS2D01G082500.1 | Wheat | cytosol | 37.74 | 30.77 |
| HORVU2Hr1G013820.4 | Barley | cytosol | 38.99 | 30.69 |
| TraesCS2B01G099400.1 | Wheat | cytosol | 38.99 | 30.69 |
| TraesCS2D01G082600.1 | Wheat | cytosol | 38.99 | 30.69 |
| HORVU7Hr1G039360.7 | Barley | cytosol | 32.7 | 29.89 |
| TraesCS2B01G098900.1 | Wheat | nucleus, plastid | 28.93 | 25.41 |
Protein Annotations
| ArrayExpress:AT5G50090 | EMBL:AK227893 | EMBL:BT004765 | EnsemblPlants:AT5G50090.1 | EnsemblPlantsGene:AT5G50090 | EntrezGene:835073 |
| InterPro:DUF4228_plant | PANTHER:PTHR33413 | PANTHER:PTHR33413:SF5 | PFAM:PF14009 | PO:PO:0000293 | ProteinID:AED95894.1 |
| ProteinID:BAB10295.1 | RefSeq:AT5G50090 | RefSeq:AT5G50090-TAIR-G | RefSeq:NP_199820.1 | SEG:seg | TAIR:AT5G50090 |
| TAIR:AT5G50090.1 | UniParc:UPI000000C473 | UniProt:Q9FGA2 | MapMan:35.2 | : | : |
Description
At5g50090 [Source:UniProtKB/TrEMBL;Acc:Q9FGA2]
Coordinates
chr5:+:20369657..20371391
Molecular Weight (calculated)
17441.3 Da
IEP (calculated)
10.352
GRAVY (calculated)
-0.504
Length
159 amino acids
Sequence
(BLAST)
(BLAST)
001: MGNCQAVDTA RVVIQHPNGK EEKLSCPVSA SYVMKMNPGH CVSLLISTTA LSSASSGHGG PLRLTRIKLL RPTDTLVLGH VYRLITTKEV MKGLMAKKCS
101: KLKKESKGSD DKLEMVKAIN STKLDNEDQL QMKKQEKERS RISRSWQPSL QSISEGGSS
101: KLKKESKGSD DKLEMVKAIN STKLDNEDQL QMKKQEKERS RISRSWQPSL QSISEGGSS
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.