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Banana
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Banana
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • plastid 1
  • cytosol 3
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus, plastid
BaCelLo:nucleus
iPSORT:plastid
MultiLoc:cytosol
Plant-mPloc:nucleus
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
GSMUA_Achr10P...
GSMUA_Achr3P04120_001
GSMUA_Achr4P01630_001

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G60010.1 GSMUA_Achr10P... AT4G26455.1 21798944
AT1G60010.1 GSMUA_Achr3P04120_001 AT4G26455.1 21798944
AT1G60010.1 GSMUA_Achr4P01630_001 AT4G26455.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
GSMUA_Achr5P23980_001 Banana cytosol 48.86 62.77
GSMUA_Achr9P18270_001 Banana cytosol 62.5 60.44
GSMUA_Achr9P28200_001 Banana cytosol 53.41 56.29
KXG30786 Sorghum cytosol 50.57 52.98
Zm00001d017998_P001 Maize cytosol 51.14 52.02
TraesCS7D01G194000.1 Wheat cytosol 47.73 51.85
TraesCS7B01G098100.1 Wheat cytosol 47.16 50.0
TraesCS6D01G288900.1 Wheat cytosol 51.14 50.0
TraesCS6B01G339300.1 Wheat cytosol 51.14 50.0
GSMUA_Achr3P10380_001 Banana cytosol, nucleus, plastid 52.27 49.73
TraesCS7A01G192700.1 Wheat cytosol 47.16 49.7
Os02t0741700-01 Rice cytosol 46.02 48.8
TraesCS6A01G309500.1 Wheat cytosol 48.3 47.22
PGSC0003DMT400040233 Potato mitochondrion 43.75 46.67
KXG19676 Sorghum cytosol 46.02 46.55
Solyc05g006030.2.1 Tomato cytosol 43.75 46.39
EER96686 Sorghum cytosol 47.16 46.37
VIT_01s0026g00730.t01 Wine grape cytosol 46.02 46.29
KRG99257 Soybean cytosol 45.45 45.98
KRH45741 Soybean cytosol 45.45 45.45
Zm00001d020348_P001 Maize cytosol 46.59 44.57
KRH69484 Soybean cytosol 42.61 43.6
Zm00001d052277_P001 Maize cytosol 41.48 43.45
AT5G50090.1 Thale cress cytosol 39.2 43.4
Zm00001d037251_P001 Maize cytosol 44.32 43.09
VIT_17s0000g07840.t01 Wine grape cytosol 44.89 42.93
Os06t0236300-01 Rice cytosol 46.02 42.86
OQU80443 Sorghum cytosol 44.89 42.7
Bra000609.1-P Field mustard cytosol 38.07 42.68
KRH74672 Soybean cytosol 41.48 42.44
HORVU6Hr1G076380.4 Barley cytosol 41.48 42.44
GSMUA_Achr9P18980_001 Banana nucleus 24.43 41.75
CDY21433 Canola cytosol 36.93 41.4
KRH57030 Soybean cytosol 42.05 41.11
CDY07805 Canola nucleus 38.64 40.96
Os09t0381600-01 Rice cytosol 48.3 40.87
Zm00001d032324_P001 Maize cytosol 43.18 40.86
Os08t0420700-01 Rice cytosol, nucleus, plastid 43.75 40.74
Bra031717.1-P Field mustard cytosol 38.07 40.36
KRH03351 Soybean cytosol 41.48 40.11
PGSC0003DMT400063216 Potato cytosol 42.61 40.11
TraesCS5A01G200100.1 Wheat cytosol 44.89 40.1
TraesCS2A01G084600.1 Wheat cytosol 44.89 39.9
AT1G60010.1 Thale cress cytosol 39.2 39.88
KRH63480 Soybean cytosol 39.2 39.88
CDY69854 Canola cytosol 39.77 39.77
CDY34887 Canola cytosol 37.5 39.76
AT5G62900.1 Thale cress cytosol 36.36 39.75
TraesCS2D01G082500.1 Wheat cytosol 43.75 39.49
Bra035410.1-P Field mustard cytosol 39.2 39.43
CDY24507 Canola cytosol 39.2 39.43
AT1G10530.1 Thale cress cytosol, mitochondrion, nucleus, plastid 36.93 39.16
HORVU2Hr1G013820.4 Barley cytosol 44.89 39.11
HORVU7Hr1G039360.7 Barley cytosol 38.64 39.08
TraesCS5B01G198500.1 Wheat cytosol 44.32 39.0
TraesCS2B01G099100.1 Wheat nucleus 44.32 39.0
TraesCS2B01G099200.1 Wheat nucleus 44.32 39.0
Bra010130.1-P Field mustard nucleus 35.23 38.75
CDY00334 Canola nucleus 35.23 38.75
TraesCS2D01G082400.1 Wheat cytosol, mitochondrion, nucleus 43.75 38.69
HORVU7Hr1G039390.1 Barley cytosol 36.36 38.55
Zm00001d044783_P001 Maize cytosol 38.07 38.51
Solyc03g114020.2.1 Tomato cytosol 40.91 38.5
TraesCS5D01G205700.1 Wheat cytosol 43.75 38.5
TraesCS5B01G198400.1 Wheat cytosol 43.75 38.5
TraesCS2D01G082300.1 Wheat cytosol 43.75 38.5
HORVU5Hr1G059690.7 Barley nucleus 44.32 38.42
CDX84364 Canola cytosol 34.66 38.12
TraesCS2B01G099400.1 Wheat cytosol 43.75 38.12
TraesCS2A01G084700.1 Wheat cytosol 43.18 38.0
KRH54436 Soybean cytosol 38.64 37.57
TraesCS2A01G084500.1 Wheat cytosol 43.75 37.56
TraesCS2A01G084400.1 Wheat cytosol 42.61 37.5
Solyc06g071320.2.1 Tomato cytosol 32.95 37.42
TraesCS2D01G082600.1 Wheat cytosol 42.61 37.13
CDY30923 Canola cytosol 36.93 36.72
Bra027820.1-P Field mustard cytosol 36.93 36.72
PGSC0003DMT400083024 Potato cytosol 33.52 36.65
CDY70563 Canola cytosol 36.93 36.31
Bra035874.1-P Field mustard cytosol 32.39 34.13
GSMUA_Achr7P26140_001 Banana cytosol 31.82 32.0
GSMUA_Achr1P22560_001 Banana cytosol 36.36 31.68
GSMUA_Achr8P31090_001 Banana cytosol 35.23 29.81
TraesCS2B01G098900.1 Wheat nucleus, plastid 30.11 29.28
CDX87268 Canola cytosol 26.14 28.75
GSMUA_Achr6P24780_001 Banana cytosol 31.82 28.28
GSMUA_Achr7P26120_001 Banana cytosol 26.7 23.5
Protein Annotations
EnsemblPlants:GSMUA_Achr3P06040_001EnsemblPlants:GSMUA_Achr3T06040_001EnsemblPlantsGene:GSMUA_Achr3G06040_001InterPro:DUF4228_plantncoils:CoilPANTHER:PTHR33413
PANTHER:PTHR33413:SF5PFAM:PF14009SEG:segUniParc:UPI0002967C60UniProt:M0SC72MapMan:35.2
Description
expressed protein [Source:GMGC_GENE;Acc:GSMUA_Achr3G06040_001]
Coordinates
chr3:-:4079054..4079914
Molecular Weight (calculated)
19718.6 Da
IEP (calculated)
9.372
GRAVY (calculated)
-0.704
Length
176 amino acids
Sequence
(BLAST)
001: MGNCQVTDAA AVVIQHPGGR AERLYWPTSA SEVMKNNPGY YVALITLYVP EEKLDGSGGG TLRLTRVRLL KATDTLLLGQ VYRLITSQEV MKAIQARKIE
101: KMKKRQAELM ERQQQQRIGT DDEVVHVGKD GEDKEDSEIT DQVAKQERDG HKTSKQSAAR PRQWRPSLQI IAETGS
Best Arabidopsis Sequence Match ( AT5G50090.1 )
(BLAST)
001: MGNCQAVDTA RVVIQHPNGK EEKLSCPVSA SYVMKMNPGH CVSLLISTTA LSSASSGHGG PLRLTRIKLL RPTDTLVLGH VYRLITTKEV MKGLMAKKCS
101: KLKKESKGSD DKLEMVKAIN STKLDNEDQL QMKKQEKERS RISRSWQPSL QSISEGGSS
Arabidopsis Description
At5g50090 [Source:UniProtKB/TrEMBL;Acc:Q9FGA2]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.