Factsheet for Bra031717.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
nucleus 3
cytosol 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra025179.1-P
Bra036351.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G10530.1	Bra025179.1-P	AT3G26030.1	21798944
AT1G10530.1	Bra036351.1-P	AT3G26030.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY07805	Canola	nucleus	97.59	97.59
CDY34887	Canola	cytosol	96.39	96.39
AT1G10530.1	Thale cress	cytosol, mitochondrion, nucleus, plastid	78.31	78.31
Bra035410.1-P	Field mustard	cytosol	59.04	56.0
Bra027820.1-P	Field mustard	cytosol	57.83	54.24
PGSC0003DMT400040233	Potato	mitochondrion	51.2	51.52
Solyc05g006030.2.1	Tomato	cytosol	50.6	50.6
VIT_01s0026g00730.t01	Wine grape	cytosol	51.2	48.57
KRH69484	Soybean	cytosol	49.4	47.67
KRH74672	Soybean	cytosol	48.19	46.51
KRG99257	Soybean	cytosol	47.59	45.4
KRH45741	Soybean	cytosol	47.59	44.89
GSMUA_Achr5P23980_001	Banana	cytosol	33.13	40.15
Bra000609.1-P	Field mustard	cytosol	37.35	39.49
Bra010130.1-P	Field mustard	nucleus	37.95	39.38
KXG30786	Sorghum	cytosol	39.76	39.29
GSMUA_Achr3P06040_001	Banana	cytosol	40.36	38.07
Bra035874.1-P	Field mustard	cytosol	37.35	37.13
GSMUA_Achr9P28200_001	Banana	cytosol	36.75	36.53
Zm00001d017998_P001	Maize	cytosol	36.75	35.26
EER96686	Sorghum	cytosol	37.95	35.2
TraesCS7D01G194000.1	Wheat	cytosol	34.34	35.19
KXG19676	Sorghum	cytosol	36.75	35.06
TraesCS7B01G098100.1	Wheat	cytosol	34.94	34.94
TraesCS7A01G192700.1	Wheat	cytosol	34.94	34.73
Zm00001d052277_P001	Maize	cytosol	34.94	34.52
TraesCS6A01G309500.1	Wheat	cytosol	37.35	34.44
GSMUA_Achr9P18270_001	Banana	cytosol	37.35	34.07
TraesCS6D01G288900.1	Wheat	cytosol	36.14	33.33
TraesCS6B01G339300.1	Wheat	cytosol	36.14	33.33
Zm00001d020348_P001	Maize	cytosol	36.75	33.15
Zm00001d037251_P001	Maize	cytosol	36.14	33.15
Os02t0741700-01	Rice	cytosol	33.13	33.13
GSMUA_Achr3P10380_001	Banana	cytosol, nucleus, plastid	36.75	32.97
OQU80443	Sorghum	cytosol	36.75	32.97
HORVU6Hr1G076380.4	Barley	cytosol	33.73	32.56
TraesCS5A01G200100.1	Wheat	cytosol	38.55	32.49
Os09t0381600-01	Rice	cytosol	40.36	32.21
TraesCS5D01G205700.1	Wheat	cytosol	38.55	32.0
TraesCS5B01G198500.1	Wheat	cytosol	38.55	32.0
Os06t0236300-01	Rice	cytosol	36.14	31.75
Zm00001d044783_P001	Maize	cytosol	33.13	31.61
HORVU5Hr1G059690.7	Barley	nucleus	38.55	31.53
TraesCS5B01G198400.1	Wheat	cytosol	37.95	31.5
Zm00001d032324_P001	Maize	cytosol	34.94	31.18
HORVU7Hr1G039390.1	Barley	cytosol	28.92	28.92
Os08t0420700-01	Rice	cytosol, nucleus, plastid	32.53	28.57
HORVU7Hr1G039360.7	Barley	cytosol	29.52	28.16
TraesCS2A01G084600.1	Wheat	cytosol	33.13	27.78
TraesCS2A01G084700.1	Wheat	cytosol	33.13	27.5
TraesCS2D01G082600.1	Wheat	cytosol	33.13	27.23
HORVU2Hr1G013820.4	Barley	cytosol	33.13	27.23
TraesCS2B01G099400.1	Wheat	cytosol	33.13	27.23
TraesCS2D01G082500.1	Wheat	cytosol	31.93	27.18
TraesCS2D01G082400.1	Wheat	cytosol, mitochondrion, nucleus	32.53	27.14
TraesCS2D01G082300.1	Wheat	cytosol	32.53	27.0
Bra037835.1-P	Field mustard	nucleus	28.92	26.52
TraesCS2B01G099200.1	Wheat	nucleus	31.33	26.0
TraesCS2A01G084500.1	Wheat	cytosol	31.93	25.85
Bra031842.1-P	Field mustard	nucleus	29.52	25.65
TraesCS2B01G099100.1	Wheat	nucleus	30.72	25.5
TraesCS2A01G084400.1	Wheat	cytosol	30.72	25.5
Bra024434.1-P	Field mustard	nucleus	24.7	24.85
TraesCS2B01G098900.1	Wheat	nucleus, plastid	20.48	18.78

Protein Annotations

EnsemblPlants:Bra031717.1	EnsemblPlants:Bra031717.1-P	EnsemblPlantsGene:Bra031717	InterPro:DUF4228_plant	PANTHER:PTHR33413	PANTHER:PTHR33413:SF4
PFAM:PF14009	UniParc:UPI00025431B5	UniProt:M4ESD9	MapMan:35.2	:	:

Description

AT1G10530 (E=8e-071) | unknown protein

Coordinates

chrA09:+:35079559..35080358

Molecular Weight (calculated)

18698.0 Da

IEP (calculated)

10.574

GRAVY (calculated)

-0.530

Length

166 amino acids

Sequence
(BLAST)

001: MGNCQTINAA ALVLQHPGGK IDRYYSSISV SEIMGMYPGH YVCLIIPLTE EEEKNIPATV KRDQKKHKKG VRFTRVQLLR PTESLVLGHA YRLITSQEVM
101: KVLREKKCAK TKKHHAEAMT TVKKLLEKNV PEKKQGKQHR ALTSSASFLK SKAWKPSLQS ISEATS

Best Arabidopsis Sequence Match ( AT1G10530.1 )
(BLAST)

001: MGNCQAVNAA VLVLQHPGGI IDRYYSSVSV TEVMAMYPGH YVSLIIPLSE EEEKNIPATE KGDDKKQRKA VRFTRVQLLR PTENLVLGHA YRLITSQEVM
101: KVLREKKSAK TKKHQIEKTT TAKKFSDKKV PEKKQGKQFR VIRNSTSLLK SKTWRPSLQS ISEATS

Arabidopsis Description

At1g10530 [Source:UniProtKB/TrEMBL;Acc:Q7XJ59]
SUBAcon: [mitochondrion,plastid,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.