Factsheet for Bra025179.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
cytosol 4
mitochondrion 2
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra007841.1-P
Bra012264.1-P
Bra016439.1-P
Bra025866.1-P
Bra032085.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G26030.1	Bra012264.1-P	AT1G21010.1	21798944
AT3G26030.1	Bra016439.1-P	AT1G21010.1	21798944
AT3G26030.1	Bra025866.1-P	AT1G21010.1	21798944
AT3G26030.1	Bra007841.1-P	AT2G24550.1	21798944
AT3G26030.1	Bra032085.1-P	AT2G24550.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY13606	Canola	cytosol	98.95	98.95
AT3G26030.1	Thale cress	cytosol	92.19	91.61
Bra036351.1-P	Field mustard	cytosol	90.93	89.79
Bra017338.1-P	Field mustard	cytosol	41.77	64.5
Bra019720.1-P	Field mustard	plastid	62.03	59.63
Bra025178.1-P	Field mustard	cytosol, plastid	62.87	59.6
Bra031294.1-P	Field mustard	cytosol, plastid	62.87	58.55
Bra039553.1-P	Field mustard	plastid	59.92	57.49
Bra012790.1-P	Field mustard	mitochondrion, plastid	58.65	56.85
Bra036352.1-P	Field mustard	cytosol, plastid	62.87	56.33
Bra001296.1-P	Field mustard	cytosol, plastid	56.96	55.21
Bra029801.1-P	Field mustard	cytosol, plastid	56.54	55.14
Bra028832.1-P	Field mustard	cytosol, plastid	52.11	51.24
Bra003201.1-P	Field mustard	golgi	40.3	50.13
Bra020504.1-P	Field mustard	mitochondrion, plastid	50.84	49.49
Bra009846.1-P	Field mustard	plastid	51.27	49.09
Bra007117.1-P	Field mustard	cytosol, plastid	50.84	48.98
Bra031075.1-P	Field mustard	mitochondrion	27.0	40.51

Protein Annotations

Gene3D:1.25.10.10	MapMan:18.4.24.1.2.3	InterPro:ARM-like	InterPro:ARM-type_fold	EnsemblPlantsGene:Bra025179	EnsemblPlants:Bra025179.1
EnsemblPlants:Bra025179.1-P	GO:GO:0000159	GO:GO:0003674	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0006464	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0019538	GO:GO:0019888	GO:GO:0030234	GO:GO:0043666	GO:GO:0050790
InterPro:IPR011989	UniProt:M4E8S3	PFAM:PF01603	PIRSF:PIRSF028043	InterPro:PP2A_B56	PANTHER:PTHR10257
PANTHER:PTHR10257:SF46	SUPFAM:SSF48371	UniParc:UPI000253F70E	:	:	:

Description

AT3G26030 (E=1e-250) ATB' DELTA | ATB' DELTA; protein phosphatase type 2A regulator

Coordinates

chrA06:-:22921286..22922778

Molecular Weight (calculated)

54718.7 Da

IEP (calculated)

7.023

GRAVY (calculated)

-0.418

Length

474 amino acids

Sequence
(BLAST)

001: MFKQILGKLP KKPSSAKFWD NGESQAPDNN NNQEVSSQRA SSNGDNLASL SVDVLPRLKD VSISEKQELF LKKLRLCCVV FDFAAEPQRN LKEKEIKRQT
101: LLEVVDYVIS SGNGKFPEPV IQEATRMVSA NLFSNPHQQH WKNKTPEAGD LEEQEEGSLN PSWPHLQIVY EFLLRIVASP NTDAKISKKY IDHTFVLKLL
201: DLFDSEDPRE REYLKTILHR IYGRFMVHRP FIRKTMNNIL YDFILETGKH SGIAEFLEVL GSIINGFALP LKEEHKLFLT RVLVPLHKLK CLPNYHQQLS
301: YCVIQFVEKD CKLADTVIKG LLKYWPVTNS SKEIMFLNEL EEILEATQLA EFERCMIPLS RQIAQCLSSS HFQVAERALY LWNNDHVSNL VRHNSRIILP
401: IVFPALEKNG SSHWNQAVKN LTENVLKVLS DTNPELFEEC LRKFQEDQQN AEDNKKKNGE TWRQLEEIVA SMAK

Best Arabidopsis Sequence Match ( AT3G26030.1 )
(BLAST)

001: MFKQILGKLP KKTSAKFWDN GESQTLDNNN NQGGGDEVLS QRTSSNGDTS LDCVSSFDVL PRLRDVSISE KQELFLKKLR LCCLVFDFVA EPQQNFKEKE
101: IKRQTLLEVV DYVISSGNGK FPESVIQEAT KMISANLFSN PHRQWKNKTP EALDLEEEEG SLNPSWPHLQ IVYEFLLRIV ASPNTDPKIS KKYIDHTFVL
201: KLLDLFDSED PREREYLKTI LHRIYGRFMV HRPFIRKTMN NILYDFIFET GKHSGIAEFL EVLGSIINGF ALPLKEEHKL FLTRVLIPLH KLKCLPNYHQ
301: QLSYCVIQFV EKDCKLADTV IRGMLKYWPV TNSAKEIMFL NELEEILEAT QLTEFERCMV PLSRQIAQCL SSSHFQVAER ALYLWNNDHV TNLVRQNSRI
401: ILPIVFPALE KNGSSHWNQA VKNLTENVLK VLSDTNPDLF EECLHKFQED QQKAEDTKKK NGETWRQLEE IVASMAK

Arabidopsis Description

B'DELTASerine/threonine protein phosphatase 2A 55 kDa regulatory subunit B' delta isoform [Source:UniProtKB/Swiss-Prot;Acc:Q9ZQY6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.