Factsheet for Bra003201.1-P

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

nucleus 1
cytosol 2
plastid 2
extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX67616	Canola	cytosol	89.5	69.73
CDY07514	Canola	cytosol	88.19	68.71
Bra007117.1-P	Field mustard	cytosol, plastid	84.78	65.65
AT3G54930.2	Thale cress	cytosol, plastid	85.56	65.59
GSMUA_Achr6P29780_001	Banana	mitochondrion	57.22	58.13
GSMUA_Achr7P17010_001	Banana	mitochondrion	57.22	52.91
GSMUA_Achr7P07360_001	Banana	cytosol	56.96	52.29
VIT_13s0019g04920.t01	Wine grape	plastid	61.94	52.21
HORVU4Hr1G003930.1	Barley	cytosol, peroxisome	60.89	51.67
PGSC0003DMT400060086	Potato	cytosol, plastid	63.25	50.74
Bra029801.1-P	Field mustard	cytosol, plastid	63.52	49.79
Bra001296.1-P	Field mustard	cytosol, plastid	63.52	49.49
Bra028832.1-P	Field mustard	cytosol, plastid	59.84	47.3
TraesCS4B01G026300.1	Wheat	mitochondrion	62.47	46.12
TraesCS4D01G023700.1	Wheat	mitochondrion	62.2	45.93
Bra031075.1-P	Field mustard	mitochondrion	38.06	45.89
KXG37844	Sorghum	plastid	62.73	45.61
Zm00001d013544_P002	Maize	cytosol, plastid	61.94	45.12
Os03t0681800-00	Rice	plasma membrane	61.94	44.11
Zm00001d033370_P001	Maize	plastid	63.25	43.58
KRH35993	Soybean	cytosol	55.12	43.3
Bra019720.1-P	Field mustard	plastid	55.12	42.6
Bra012790.1-P	Field mustard	mitochondrion, plastid	54.59	42.54
Bra039553.1-P	Field mustard	plastid	55.12	42.51
Bra025178.1-P	Field mustard	cytosol, plastid	54.59	41.6
Bra031294.1-P	Field mustard	cytosol, plastid	55.12	41.26
Bra025179.1-P	Field mustard	cytosol	50.13	40.3
Bra036352.1-P	Field mustard	cytosol, plastid	55.91	40.26
Bra036351.1-P	Field mustard	cytosol	49.61	39.38
Bra020504.1-P	Field mustard	mitochondrion, plastid	47.24	36.96
Bra009846.1-P	Field mustard	plastid	47.24	36.36
Bra017338.1-P	Field mustard	cytosol	16.54	20.52

Protein Annotations

Gene3D:1.25.10.10	MapMan:18.4.24.1.2.3	InterPro:ARM-like	InterPro:ARM-type_fold	EnsemblPlantsGene:Bra003201	EnsemblPlants:Bra003201.1
EnsemblPlants:Bra003201.1-P	GO:GO:0000159	GO:GO:0003674	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0006464	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0019538	GO:GO:0019888	GO:GO:0030234	GO:GO:0043666	GO:GO:0050790
InterPro:IPR011989	UniProt:M4CG68	PFAM:PF01603	PIRSF:PIRSF028043	InterPro:PP2A_B56	PANTHER:PTHR10257
PANTHER:PTHR10257:SF45	SUPFAM:SSF48371	UniParc:UPI0002541446	SEG:seg	:	:

Description

AT3G54930 (E=5e-163) | serine/threonine protein phosphatase 2A (PP2A) regulatory subunit B', putative

Coordinates

chrA07:-:11831300..11837048

Molecular Weight (calculated)

44663.2 Da

IEP (calculated)

6.199

GRAVY (calculated)

-0.176

Length

381 amino acids

Sequence
(BLAST)

001: MHRGTHSHVF FHNMTTNIIK ICLPQYGVVL MLLPLRSQTS PPFIIASKNT GAPPEGNDPE EEEPYLEPWW PHLQLVYELL LRYVVSSEIE PKTAKKFINH
101: TFVSRLLDLF DSEDPREREY LKTVLHRIYG KFIFHRPFIR CSIYNIFYKY LYETERCVGI GELLEILGSV INGFTVPMRE EHVLYLVKAI LPLHKSKGIS
201: IFHQQLSYCV VQFVEKDYKL ADTVIRGLLK YWPLTNCNKE VLFLGELEEV LDVTEPSEFQ HCVVPLFRQI GKCLNSANFQ VAERALFLWN NEHIVGLIAE
301: NKDMIFPIIF EALERNMKGH WNQAVHGLSE NVRRMFMEMD NELFEECEKR HLENEAKACE LLEQREMTWK RLEEAASLAA N

Best Arabidopsis Sequence Match ( AT3G54930.2 )
(BLAST)

001: MFNKIIKLGQ KKFNKSDQHH QDNNNNNNNT STNTVVRGSR TTTPAPSSVS NGESQTTAQS PSQTPNHPMF TTTPILEVLP LLKDVSSSDR PLLFMKKAHM
101: CSCHCDFSDT LIMPREKEIK RQTLLELVDF LHSSSGKVNE TMQSELIRMV SANIFRCLPP AYHENTGAPP EGNDPEEEEP YLEPWWPHLQ LVYELLLRYV
201: VSSEIEPKTA KKFINHTFVS RLLDLFDSED PREREYLKTV LHRIYGKFIF HRPFIRCSIY NIFYKFLYET ERCIGIGELL EILGSVINGF TVPMREEHRL
301: YLVKAILPLH KSKGISIYHQ QLAYCVTQFV EKDYKLADTV IRGLLKFWPL TNCQKEVLFL GELEEVLDAT EPSEFQQCVV PLFTQIGKCL NSAHFQVAER
401: ALFLWNNEHI VGLIAQNKDV IFPIIFEALE RNMKGHWNQA VHGLSENVRR MFLEMDTELF EECEKQYLEN EAKACELLEQ RELTWKRLEE AASLAAN

Arabidopsis Description

B'EPSILONSerine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' epsilon isoform [Source:UniProtKB/Swiss-Prot;Acc:Q9SV41]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.