CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
plastid 3
cytosol 2
mitochondrion 3
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d013544_P002	Maize	cytosol, plastid	95.23	95.41
HORVU4Hr1G003930.1	Barley	cytosol, peroxisome	79.01	92.2
Zm00001d033370_P001	Maize	plastid	95.99	90.96
TraesCS4B01G026300.1	Wheat	mitochondrion	87.21	88.57
TraesCS4D01G023700.1	Wheat	mitochondrion	87.02	88.37
Os03t0681800-00	Rice	plasma membrane	87.6	85.79
GSMUA_Achr7P17010_001	Banana	mitochondrion	62.02	78.88
GSMUA_Achr7P07360_001	Banana	cytosol	61.64	77.83
GSMUA_Achr6P29780_001	Banana	mitochondrion	54.58	76.27
VIT_13s0019g04920.t01	Wine grape	plastid	60.5	70.13
PGSC0003DMT400060086	Potato	cytosol, plastid	61.64	68.0
Bra003201.1-P	Field mustard	golgi	45.61	62.73
KRH35993	Soybean	cytosol	56.87	61.44
AT3G54930.2	Thale cress	cytosol, plastid	56.87	59.96
CDX67616	Canola	cytosol	55.34	59.3
CDY07514	Canola	cytosol	55.34	59.3
Bra007117.1-P	Field mustard	cytosol, plastid	55.53	59.15
CDY56962	Canola	cytosol, plastid	55.53	59.15
OQU79819	Sorghum	cytosol	55.92	55.39
KXG26587	Sorghum	mitochondrion	53.05	54.51
CDX73425	Canola	cytosol, plastid	55.73	54.38
EER93109	Sorghum	cytosol, plastid	53.82	54.34
OQU88848	Sorghum	cytosol	50.76	52.78
EES19134	Sorghum	plastid	48.47	52.48
EES03447	Sorghum	plastid	48.66	51.0
EES18643	Sorghum	plastid	47.71	49.9
EES00199	Sorghum	cytosol, mitochondrion, plastid	47.52	49.5
EER99281	Sorghum	mitochondrion	34.54	38.43

Protein Annotations

Gene3D:1.25.10.10	MapMan:18.4.24.1.2.3	UniProt:A0A1B6QIU1	InterPro:ARM-like	InterPro:ARM-type_fold	ncoils:Coil
GO:GO:0000159	GO:GO:0003674	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0006464	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0019538	GO:GO:0019888	GO:GO:0030234	GO:GO:0043666	GO:GO:0050790
InterPro:IPR011989	EnsemblPlants:KXG37844	ProteinID:KXG37844	ProteinID:KXG37844.1	PFAM:PF01603	PIRSF:PIRSF028043
InterPro:PP2A_B56	PANTHER:PTHR10257	PANTHER:PTHR10257:SF45	EnsemblPlantsGene:SORBI_3001G136600	SUPFAM:SSF48371	UniParc:UPI0001C80DB5
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr1:+:10805377..10811695

Molecular Weight (calculated)

58151.9 Da

IEP (calculated)

7.321

GRAVY (calculated)

-0.200

Length

524 amino acids

Sequence
(BLAST)

001: MFNKIIKRGN RKGARGDSAE SAARPAAPSS SSGSGGGGGA GGAAPVTVNH ASRGTGPSPS SPTSPHVAPS ALVTNQAAGA ASPPLLEPLP LLRDVAAADR
101: PGLLLRKLRL VAAVFDLSDS LKHPREKEAK RQALLELVDY VQAPAQAAGA NAQARLPDHV QEALVAAISA NIFRPLPPAL HESAAAIDPG AAPDDEEEPY
201: LDPSWPHLQL VYDLLLRYVV SPDTDTKVAK RYVDHAFVLR LLDLFDSEDP REREYLKTVL HRIYGKFMVH RPFIRKAINN VFYRFIFETQ RHNGIGELLE
301: ILGSIINGFA LPMKEEHKLF LARALIPLHK PKSVGIYHQQ LSYCIVQFVE KDYKLADTVI RGLLKYWPVT NCQKEVLFLG ELEEVLEATQ PAEFQRCMVP
401: LFKQIGRCLN SSHFQVAERA LFLWNNDHIV SLIAQNRGAI FPIIFEALER NIQSHWNQAV HGLTANVRKM FLDMDSELFE ECQHQYMEKQ AKAKEMQEQR
501: ESAWRQLEAV VAAKAAGDDM VLVN

Best Arabidopsis Sequence Match ( AT5G03470.1 )
(BLAST)

001: MFKKIMKGAN RKASKAEAND SSMYGFDPPG RSGPGSNMIV NHASRGSLVP SSPNSMAAAT TQPPPMYSVE PLPLFRDVSV SERQSLFLRK LQICCFQFDF
101: TDTLKNAREK EIKRQTLLEL VDFIQSGAGK LTEVCQEEMV KMISVNIFRC LPPASHENTG QEPADLEEEE PYLEPSWPHL QLIYELLLRY IVPSDTDTKV
201: AKRYIDHSFV LRLLELFETE DPREREYLKT ILHRIYGKFM VHRPFIRKAM NHIFYRFIYE TERHSGIGEL LEILGSIING FALPMKEEHK LFLIRALIPL
301: HKPKPIAMYH QQLSYCIVQF VEKDYKLADT VIRGLLKFWP VTNCTKEVLF LGELEEVLEA TQTVEFQRCM VPLFQQIARC LSSSNFQVAE RALFLWNNEH
401: VVGLIAQNRG VILPIIFASL EKNIESHWNQ AVHGLSANIK RMFMEMDPEL FEECQQQYEE KQAKSKQVEE QRQNRWRRLD EAVEERERED PMITS

Arabidopsis Description

B'ALPHAATB' ALPHA [Source:UniProtKB/TrEMBL;Acc:A0A178UNX1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.