CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
cytosol 4
nucleus 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG90768	Soybean	extracellular, mitochondrion	14.43	74.47
VIT_13s0019g04920.t01	Wine grape	plastid	61.03	65.49
KRH67758	Soybean	plastid	62.68	64.68
KRG96039	Soybean	cytosol, plastid	62.06	64.45
KRH32554	Soybean	cytosol	63.92	63.79
KRH19952	Soybean	cytosol	62.89	63.15
GSMUA_Achr7P17010_001	Banana	mitochondrion	53.61	63.11
HORVU4Hr1G003930.1	Barley	cytosol, peroxisome	58.35	63.03
GSMUA_Achr6P29780_001	Banana	mitochondrion	48.25	62.4
GSMUA_Achr7P07360_001	Banana	cytosol	52.37	61.2
PGSC0003DMT400060086	Potato	cytosol, plastid	59.79	61.05
TraesCS4D01G023700.1	Wheat	mitochondrion	62.06	58.33
TraesCS4B01G026300.1	Wheat	mitochondrion	61.65	57.95
Zm00001d013544_P002	Maize	cytosol, plastid	61.44	56.98
KXG37844	Sorghum	plastid	61.44	56.87
Os03t0681800-00	Rice	plasma membrane	62.06	56.26
Bra003201.1-P	Field mustard	golgi	43.3	55.12
Zm00001d033370_P001	Maize	plastid	62.68	54.97
AT3G54930.2	Thale cress	cytosol, plastid	56.29	54.93
CDX67616	Canola	cytosol	55.26	54.81
Bra007117.1-P	Field mustard	cytosol, plastid	55.26	54.47
CDY56962	Canola	cytosol, plastid	55.26	54.47
CDY07514	Canola	cytosol	54.85	54.4
KRG97478	Soybean	cytosol, plastid	55.05	51.64
KRH31415	Soybean	cytosol, plastid	55.05	51.25
KRG94414	Soybean	plastid	55.26	51.24
KRH52526	Soybean	cytosol	51.34	50.1
CDX73425	Canola	cytosol, plastid	55.46	50.09
KRH14754	Soybean	cytosol, plastid	55.26	50.0
KRH73387	Soybean	cytosol, plastid	55.26	49.91
KRH61853	Soybean	plastid	50.93	49.8
KRH05059	Soybean	cytosol, mitochondrion, plastid	49.69	48.98
KRH16045	Soybean	cytosol, mitochondrion, plastid	49.69	48.98
KRG94343	Soybean	cytosol, plastid	53.2	48.13
KRH57624	Soybean	cytosol, mitochondrion	52.78	47.94
KRH56674	Soybean	cytosol	49.48	46.6
KRH03791	Soybean	cytosol	48.45	45.72
KRH36100	Soybean	plastid	35.46	37.64

Protein Annotations

Gene3D:1.25.10.10	EntrezGene:100788774	MapMan:18.4.24.1.2.3	EMBL:ACUP02006715	InterPro:ARM-like	InterPro:ARM-type_fold
ncoils:Coil	EnsemblPlantsGene:GLYMA_10G277100	GO:GO:0000159	GO:GO:0003674	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006464	GO:GO:0007154	GO:GO:0007165
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0019538	GO:GO:0019888	GO:GO:0030234
GO:GO:0043666	GO:GO:0050790	UniProt:I1LEZ5	InterPro:IPR011989	EnsemblPlants:KRH35993	ProteinID:KRH35993
ProteinID:KRH35993.1	PFAM:PF01603	PIRSF:PIRSF028043	InterPro:PP2A_B56	PANTHER:PTHR10257	PANTHER:PTHR10257:SF45
SUPFAM:SSF48371	UniParc:UPI00023CE6B9	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr10:+:49932961..49936949

Molecular Weight (calculated)

56854.7 Da

IEP (calculated)

6.456

GRAVY (calculated)

-0.250

Length

485 amino acids

Sequence
(BLAST)

001: MFNKIIKLAH KKCSKLEFLE NGQQFYEVVI KHASRSATAT PATVNSDSQN PPPSSLLPNP TAIESLPPLR DVDVSERPAL FLRKIQVCCF LCDFSDVLKY
101: VYEKETKRQT LEELVEIIQS GSFGFTENQE DLINMVSVNI FRCFPPSSLN TQNVDPEDDE KYQEPSWPHL QLVYEILLRY IVSPETDIKT SKRYIDHIFV
201: LKLIELFDSE DQHEREYLKT ILHRIYGKFM VHRPFIRTAI NNVFYRFIFE TQRHNGIAEL LEILGSIING FALPMKEEHK LFFIRTLIPL HKPKTFSSYN
301: QQLSYCVVQF VEKDNRLADP VIKGMLKYWP VTNYQKEVFF LAELEEIIEA IQYPEFVHCT VSLFRQIGRC LNSPHFQVAE RALYLWKNEQ IISIVSQNRN
401: VILPVIFEAL ENNLKSHWNR AVLGLTANVR KMFLEMDAEL FEECQKQYLE KEARARELEE KRELTWKKLE AVAAQAVRDD MVLVK

Best Arabidopsis Sequence Match ( AT3G54930.2 )
(BLAST)

001: MFNKIIKLGQ KKFNKSDQHH QDNNNNNNNT STNTVVRGSR TTTPAPSSVS NGESQTTAQS PSQTPNHPMF TTTPILEVLP LLKDVSSSDR PLLFMKKAHM
101: CSCHCDFSDT LIMPREKEIK RQTLLELVDF LHSSSGKVNE TMQSELIRMV SANIFRCLPP AYHENTGAPP EGNDPEEEEP YLEPWWPHLQ LVYELLLRYV
201: VSSEIEPKTA KKFINHTFVS RLLDLFDSED PREREYLKTV LHRIYGKFIF HRPFIRCSIY NIFYKFLYET ERCIGIGELL EILGSVINGF TVPMREEHRL
301: YLVKAILPLH KSKGISIYHQ QLAYCVTQFV EKDYKLADTV IRGLLKFWPL TNCQKEVLFL GELEEVLDAT EPSEFQQCVV PLFTQIGKCL NSAHFQVAER
401: ALFLWNNEHI VGLIAQNKDV IFPIIFEALE RNMKGHWNQA VHGLSENVRR MFLEMDTELF EECEKQYLEN EAKACELLEQ RELTWKRLEE AASLAAN

Arabidopsis Description

B'EPSILONSerine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' epsilon isoform [Source:UniProtKB/Swiss-Prot;Acc:Q9SV41]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.