CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, extracellular

Predictor Summary:

plastid 2
cytosol 1
mitochondrion 3
extracellular 2
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, mitochondrion
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	mitochondrion
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH35993	Soybean	cytosol	74.47	14.43
KRG96039	Soybean	cytosol, plastid	63.83	12.85
KRH67758	Soybean	plastid	62.77	12.55
KRH19952	Soybean	cytosol	63.83	12.42
KRH32554	Soybean	cytosol	63.83	12.35
KRH31415	Soybean	cytosol, plastid	67.02	12.09
KRG97478	Soybean	cytosol, plastid	64.89	11.8
KRG94414	Soybean	plastid	64.89	11.66
KRH57624	Soybean	cytosol, mitochondrion	65.96	11.61
KRH52526	Soybean	cytosol	60.64	11.47
KRH14754	Soybean	cytosol, plastid	64.89	11.38
KRG94343	Soybean	cytosol, plastid	64.89	11.38
KRH73387	Soybean	cytosol, plastid	64.89	11.36
KRH61853	Soybean	plastid	59.57	11.29
KRH03791	Soybean	cytosol	58.51	10.7
KRH56674	Soybean	cytosol	58.51	10.68
KRH05059	Soybean	cytosol, mitochondrion, plastid	55.32	10.57
KRH16045	Soybean	cytosol, mitochondrion, plastid	54.26	10.37
KRH36100	Soybean	plastid	43.62	8.97

Protein Annotations

Gene3D:1.25.10.10	MapMan:35.1	UniProt:A0A0R0EB29	EMBL:ACUP02012640	InterPro:ARM-like	InterPro:ARM-type_fold
EnsemblPlantsGene:GLYMA_20G112700	GO:GO:0000159	GO:GO:0003674	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0006464	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0019538	GO:GO:0019888	GO:GO:0030234	GO:GO:0043666	GO:GO:0050790
InterPro:IPR011989	EnsemblPlants:KRG90768	ProteinID:KRG90768	ProteinID:KRG90768.1	PFAM:PF01603	InterPro:PP2A_B56
PANTHER:PTHR10257	PANTHER:PTHR10257:SF46	SUPFAM:SSF48371	UniParc:UPI0006ED58D6	:	:

Description

hypothetical protein

Coordinates

chr20:-:35477411..35479923

Molecular Weight (calculated)

10697.4 Da

IEP (calculated)

10.861

GRAVY (calculated)

0.188

Length

94 amino acids

Sequence
(BLAST)

1: MLHRPFIRTA INNVLYGFIL ETQRHNGIAE LLEILGSIIN GFALPMKEKH KLFLIGTLIP LHKPKTFSSY HQQGNNSLIA SFSLLRKTTG WLIL

Best Arabidopsis Sequence Match ( AT4G15415.1 )
(BLAST)

001: MIKQIFGKLP RKPSKSSHND SNPNGEGGVN SYYIPNSGIS SISKPSSKSS ASNSNGANGT VIAPSSTSSN RTNQVNGVYE ALPSFRDVPT SEKPNLFIKK
101: LSMCCVVFDF NDPSKNLREK EIKRQTLLEL VDYIATVSTK LSDAAMQEIA KVAVVNLFRT FPSANHESKI LETLDVDDEE PALEPAWPHL QVVYELLLRF
201: VASPMTDAKL AKRYIDHSFV LKLLDLFDSE DQREREYLKT ILHRIYGKFM VHRPFIRKAI NNIFYRFIFE TEKHNGIAEL LEILGSIING FALPLKEEHK
301: LFLIRALIPL HRPKCASAYH QQLSYCIVQF VEKDFKLADT VIRGLLKYWP VTNSSKEVMF LGELEEVLEA TQAAEFQRCM VPLFRQIARC LNSSHFQVAE
401: RALFLWNNDH IRNLITQNHK VIMPIVFPAM ERNTRGHWNQ AVQSLTLNVR KVMAETDQIL FDECLAKFQE DEANETEVVA KREATWKLLE ELAASKSVSN
501: EAVLVPRFSS SVTLATGKTS GS

Arabidopsis Description

B'GAMMASerine/threonine protein phosphatase 2A 59 kDa regulatory subunit B' gamma isoform [Source:UniProtKB/Swiss-Prot;Acc:Q8RW96]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.