CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
plastid 3
cytosol 4
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH32554	Soybean	cytosol	96.07	95.47
KRG96039	Soybean	cytosol, plastid	81.16	83.94
KRH67758	Soybean	plastid	81.57	83.83
Bra001296.1-P	Field mustard	cytosol, plastid	77.85	76.89
CDX73997	Canola	cytosol, plastid	77.85	76.89
AT3G09880.1	Thale cress	cytosol, plastid	79.3	76.75
CDY41574	Canola	cytosol	77.43	76.64
CDY54611	Canola	cytosol	77.43	76.33
CDY07942	Canola	cytosol, plastid	77.43	76.17
Bra029801.1-P	Field mustard	cytosol, plastid	76.4	75.93
Solyc09g008400.2.1	Tomato	nucleus	75.57	74.04
PGSC0003DMT400072691	Potato	cytosol, mitochondrion	74.95	73.58
Solyc10g083920.1.1	Tomato	nucleus	74.74	73.37
VIT_08s0007g04850.t01	Wine grape	cytosol	76.19	73.31
AT5G03470.1	Thale cress	cytosol	74.33	72.53
CDY04885	Canola	cytosol, plastid	69.77	69.92
CDY44370	Canola	cytosol, plastid	68.94	68.94
Bra028832.1-P	Field mustard	cytosol, plastid	68.74	68.88
KRG90768	Soybean	extracellular, mitochondrion	12.42	63.83
KRH35993	Soybean	cytosol	63.15	62.89
KRG97478	Soybean	cytosol, plastid	60.66	56.67
KRH31415	Soybean	cytosol, plastid	61.08	56.62
KRG94414	Soybean	plastid	61.28	56.6
KRH14754	Soybean	cytosol, plastid	62.11	55.97
KRH73387	Soybean	cytosol, plastid	62.11	55.87
CDY08231	Canola	mitochondrion	38.92	55.79
KRH57624	Soybean	cytosol, mitochondrion	61.49	55.62
KRG94343	Soybean	cytosol, plastid	61.28	55.22
Bra031075.1-P	Field mustard	mitochondrion	35.2	53.8
KRH05059	Soybean	cytosol, mitochondrion, plastid	54.66	53.66
KRH16045	Soybean	cytosol, mitochondrion, plastid	54.66	53.66
KRH52526	Soybean	cytosol	54.87	53.32
KRH61853	Soybean	plastid	54.66	53.23
CDY67412	Canola	mitochondrion	35.4	52.78
KRH56674	Soybean	cytosol	54.04	50.68
KRH03791	Soybean	cytosol	53.62	50.39
CDY35507	Canola	golgi	31.26	49.84
KRH36100	Soybean	plastid	36.44	38.51

Protein Annotations

Gene3D:1.25.10.10	EntrezGene:100814538	MapMan:18.4.24.1.2.3	EMBL:ACUP02008218	InterPro:ARM-like	InterPro:ARM-type_fold
ncoils:Coil	EnsemblPlantsGene:GLYMA_13G145700	GO:GO:0000159	GO:GO:0003674	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0006464	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0019538	GO:GO:0019888	GO:GO:0030234	GO:GO:0043666
GO:GO:0050790	InterPro:IPR011989	UniProt:K7LZS7	EnsemblPlants:KRH19952	ProteinID:KRH19952	ProteinID:KRH19952.1
PFAM:PF01603	PIRSF:PIRSF028043	InterPro:PP2A_B56	PANTHER:PTHR10257	PANTHER:PTHR10257:SF46	SUPFAM:SSF48371
UniParc:UPI000233AF51	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr13:+:25867625..25874836

Molecular Weight (calculated)

55524.2 Da

IEP (calculated)

6.948

GRAVY (calculated)

-0.259

Length

483 amino acids

Sequence
(BLAST)

001: MFKKIMKGGH KKPSKSDASD PAPQPYAAAN FSAPAAPSAN VVVNFVSLTP LTLSSGGSVE PVPPFRDAPV AERQNLFLRK LHVCCYILDF SDTLKNVREK
101: EIKRQALMDL VDFIQSGSGK ISENCQEEMI RMISVNIFRC LPPASHENTG QEPTDPEEEE PSLDPSWPHL QLVYELLLRY VVSSDTDTKI AKRYIDHSFV
201: LKLLDLFDSE DPREREYLKT ILHRIYGKFM VHRPFIRKAI NNIFYRFIYE TERHSGIGEL LEILGSIING FALPMKEEHK LFLVRALLPL HKPKSVGMYH
301: QQLSYCITQF VEKDFKLADT VIRGLLKYWP VTNCQKEVLF LGELEEVLEA TQAAEFQRCM IPLFRQISRC LNSSHFQVAE RALFLWNNEH IVSLIAQNRT
401: VILPIIFQAF EKNISSHWNQ AVHGLTMNVR KMFLEMDAEL FEECQRKHAE KEAKAKELAE QRELNWKRLA DAAAQNGVED MVT

Best Arabidopsis Sequence Match ( AT3G09880.1 )
(BLAST)

001: MFKKIMKGGH RKPSKSEANE PSSYGIGLPD NRSGPGSNVV VSHASRGALV NSSPSPVTAT PPPPPLGSVE PLPLFRDVPV SERQTLFLRK LQNCCFLFDF
101: TDTIKNARDK EIKRQTLLEL VDFIQSGSSK ISESCQEEMI KMISVNIFRS LPPASHENTG QEPADPEEEE PYLEPSWPHL QLVYELLLRY VVSTDTDTKV
201: AKRYIDHSFV LKLLDLFDSE DPREREYLKT ILHRIYGKFM VHRPFIRKAI NNIFYRFIYE TERHSGIGEL LEILGSIING FALPMKEEHK LFLIRVLIPL
301: HKPKPIVVYH QQLSYCIVQF VEKDYKLADT VIRGLLKYWP VTNCSKENLF LGELEEVLEA TQPVEFQRCM VPLFQQIGRC LTSSHFQVAE RALFLWNNEH
401: IVGLIAQNRS VILPIIYPTL EKNIQSHWNQ AVHGLTTNIK KMFMEMDPEL FEECQRQYEE KQAKSKEVEE QRQYTWKRLA EAAAERDGGG GEEDHMITS

Arabidopsis Description

B'BETASerine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' beta isoform [Source:UniProtKB/Swiss-Prot;Acc:O04376]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.