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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid, cytosol

Predictor Summary:
  • nucleus 2
  • plastid 2
  • cytosol 2
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY41574 Canola cytosol 90.98 93.03
CDX73997 Canola cytosol, plastid 90.98 92.84
CDY07942 Canola cytosol, plastid 91.18 92.67
Bra001296.1-P Field mustard cytosol, plastid 90.78 92.64
CDY54611 Canola cytosol 90.38 92.04
Bra029801.1-P Field mustard cytosol, plastid 89.58 91.98
AT5G03470.1 Thale cress cytosol 83.37 84.04
KRH67758 Soybean plastid 74.95 79.57
KRG96039 Soybean cytosol, plastid 74.35 79.44
KRH19952 Soybean cytosol 76.75 79.3
KRH32554 Soybean cytosol 76.75 78.81
VIT_08s0007g04850.t01 Wine grape cytosol 75.75 75.3
Solyc10g083920.1.1 Tomato nucleus 73.15 74.19
Solyc09g008400.2.1 Tomato nucleus 72.95 73.83
PGSC0003DMT400072691 Potato cytosol, mitochondrion 72.75 73.78
AT3G54930.2 Thale cress cytosol, plastid 61.72 61.97
AT1G13460.2 Thale cress cytosol, plastid 58.92 59.76
AT4G15415.5 Thale cress cytosol, plastid 62.12 59.39
AT3G26030.1 Thale cress cytosol 54.91 57.44
AT3G21650.2 Thale cress nucleus, plastid 60.12 54.95
AT3G26020.4 Thale cress cytosol, plastid 56.11 52.93
AT5G25510.1 Thale cress cytosol, mitochondrion, plastid 52.1 52.0
Protein Annotations
Gene3D:1.25.10.10MapMan:18.4.24.1.2.3EntrezGene:820146UniProt:A0A178VQB1ProteinID:AAF23248.1ProteinID:AEE74825.1
InterPro:ARM-likeInterPro:ARM-type_foldArrayExpress:AT3G09880EnsemblPlantsGene:AT3G09880RefSeq:AT3G09880TAIR:AT3G09880
RefSeq:AT3G09880-TAIR-GEnsemblPlants:AT3G09880.1TAIR:AT3G09880.1Symbol:ATB' BETAEMBL:AY072226EMBL:AY113852
Unigene:At.44943ncoils:CoilGO:GO:0000159GO:GO:0003674GO:GO:0005488GO:GO:0005515
GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005634GO:GO:0005737GO:GO:0006464
GO:GO:0007154GO:GO:0007165GO:GO:0008150GO:GO:0008152GO:GO:0009719GO:GO:0009742
GO:GO:0009987GO:GO:0019538GO:GO:0019888GO:GO:0030234GO:GO:0043666GO:GO:0050790
InterPro:IPR011989RefSeq:NP_187599.1UniProt:O04376ProteinID:OAP07072.1PFAM:PF01603PIRSF:PIRSF028043
PO:PO:0000013PO:PO:0000037PO:PO:0000230PO:PO:0000293PO:PO:0001016PO:PO:0001017
PO:PO:0001054PO:PO:0001078PO:PO:0001081PO:PO:0001185PO:PO:0004507PO:PO:0007064
PO:PO:0007095PO:PO:0007098PO:PO:0007103PO:PO:0007115PO:PO:0007123PO:PO:0007611
PO:PO:0007616PO:PO:0008019PO:PO:0009005PO:PO:0009006PO:PO:0009009PO:PO:0009010
PO:PO:0009025PO:PO:0009029PO:PO:0009030PO:PO:0009031PO:PO:0009032PO:PO:0009046
PO:PO:0009047PO:PO:0009052PO:PO:0020030PO:PO:0020038PO:PO:0020100PO:PO:0020137
PO:PO:0025022PO:PO:0025281InterPro:PP2A_B56PANTHER:PTHR10257PANTHER:PTHR10257:SF46SUPFAM:SSF48371
EMBL:U73527UniParc:UPI00000A343FSEG:seg:::
Description
B'BETASerine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' beta isoform [Source:UniProtKB/Swiss-Prot;Acc:O04376]
Coordinates
chr3:+:3029471..3032399
Molecular Weight (calculated)
57475.2 Da
IEP (calculated)
6.616
GRAVY (calculated)
-0.383
Length
499 amino acids
Sequence
(BLAST)
001: MFKKIMKGGH RKPSKSEANE PSSYGIGLPD NRSGPGSNVV VSHASRGALV NSSPSPVTAT PPPPPLGSVE PLPLFRDVPV SERQTLFLRK LQNCCFLFDF
101: TDTIKNARDK EIKRQTLLEL VDFIQSGSSK ISESCQEEMI KMISVNIFRS LPPASHENTG QEPADPEEEE PYLEPSWPHL QLVYELLLRY VVSTDTDTKV
201: AKRYIDHSFV LKLLDLFDSE DPREREYLKT ILHRIYGKFM VHRPFIRKAI NNIFYRFIYE TERHSGIGEL LEILGSIING FALPMKEEHK LFLIRVLIPL
301: HKPKPIVVYH QQLSYCIVQF VEKDYKLADT VIRGLLKYWP VTNCSKENLF LGELEEVLEA TQPVEFQRCM VPLFQQIGRC LTSSHFQVAE RALFLWNNEH
401: IVGLIAQNRS VILPIIYPTL EKNIQSHWNQ AVHGLTTNIK KMFMEMDPEL FEECQRQYEE KQAKSKEVEE QRQYTWKRLA EAAAERDGGG GEEDHMITS
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.