Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra025179.1-P | Field mustard | cytosol | 91.61 | 92.19 |
| CDY13606 | Canola | cytosol | 91.19 | 91.77 |
| CDX83579 | Canola | cytosol | 90.99 | 91.37 |
| Bra036351.1-P | Field mustard | cytosol | 89.1 | 88.54 |
| AT1G13460.2 | Thale cress | cytosol, plastid | 61.22 | 59.35 |
| AT4G15415.5 | Thale cress | cytosol, plastid | 60.59 | 55.36 |
| AT3G09880.1 | Thale cress | cytosol, plastid | 57.44 | 54.91 |
| AT5G03470.1 | Thale cress | cytosol | 55.77 | 53.74 |
| AT3G21650.2 | Thale cress | nucleus, plastid | 61.22 | 53.48 |
| AT3G26020.4 | Thale cress | cytosol, plastid | 57.65 | 51.98 |
| AT5G25510.1 | Thale cress | cytosol, mitochondrion, plastid | 50.73 | 48.4 |
| AT3G54930.2 | Thale cress | cytosol, plastid | 50.1 | 48.09 |
| CDY40986 | Canola | nucleus, plastid | 89.1 | 44.55 |
| CDX99733 | Canola | nucleus, plastid | 90.15 | 42.49 |
Protein Annotations
| Gene3D:1.25.10.10 | MapMan:18.4.24.1.2.3 | EntrezGene:822200 | ProteinID:AEE77106.1 | EMBL:AF062396 | InterPro:ARM-like |
| InterPro:ARM-type_fold | ArrayExpress:AT3G26030 | EnsemblPlantsGene:AT3G26030 | RefSeq:AT3G26030 | TAIR:AT3G26030 | RefSeq:AT3G26030-TAIR-G |
| EnsemblPlants:AT3G26030.1 | TAIR:AT3G26030.1 | Symbol:ATB' DELTA | EMBL:AY091037 | EMBL:AY117349 | ProteinID:BAB01066.1 |
| GO:GO:0000159 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005730 | GO:GO:0005737 | GO:GO:0006464 | GO:GO:0007154 |
| GO:GO:0007165 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0019538 | GO:GO:0019888 |
| GO:GO:0030234 | GO:GO:0043666 | GO:GO:0050790 | InterPro:IPR011989 | RefSeq:NP_189232.1 | PFAM:PF01603 |
| PIRSF:PIRSF028043 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 |
| PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 |
| PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 |
| PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 |
| PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 |
| PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 |
| PO:PO:0025281 | InterPro:PP2A_B56 | PANTHER:PTHR10257 | PANTHER:PTHR10257:SF46 | UniProt:Q9ZQY6 | SUPFAM:SSF48371 |
| UniParc:UPI00000A3FC7 | : | : | : | : | : |
Description
B'DELTASerine/threonine protein phosphatase 2A 55 kDa regulatory subunit B' delta isoform [Source:UniProtKB/Swiss-Prot;Acc:Q9ZQY6]
Coordinates
chr3:+:9516953..9519563
Molecular Weight (calculated)
55243.4 Da
IEP (calculated)
6.702
GRAVY (calculated)
-0.395
Length
477 amino acids
Sequence
(BLAST)
(BLAST)
001: MFKQILGKLP KKTSAKFWDN GESQTLDNNN NQGGGDEVLS QRTSSNGDTS LDCVSSFDVL PRLRDVSISE KQELFLKKLR LCCLVFDFVA EPQQNFKEKE
101: IKRQTLLEVV DYVISSGNGK FPESVIQEAT KMISANLFSN PHRQWKNKTP EALDLEEEEG SLNPSWPHLQ IVYEFLLRIV ASPNTDPKIS KKYIDHTFVL
201: KLLDLFDSED PREREYLKTI LHRIYGRFMV HRPFIRKTMN NILYDFIFET GKHSGIAEFL EVLGSIINGF ALPLKEEHKL FLTRVLIPLH KLKCLPNYHQ
301: QLSYCVIQFV EKDCKLADTV IRGMLKYWPV TNSAKEIMFL NELEEILEAT QLTEFERCMV PLSRQIAQCL SSSHFQVAER ALYLWNNDHV TNLVRQNSRI
401: ILPIVFPALE KNGSSHWNQA VKNLTENVLK VLSDTNPDLF EECLHKFQED QQKAEDTKKK NGETWRQLEE IVASMAK
101: IKRQTLLEVV DYVISSGNGK FPESVIQEAT KMISANLFSN PHRQWKNKTP EALDLEEEEG SLNPSWPHLQ IVYEFLLRIV ASPNTDPKIS KKYIDHTFVL
201: KLLDLFDSED PREREYLKTI LHRIYGRFMV HRPFIRKTMN NILYDFIFET GKHSGIAEFL EVLGSIINGF ALPLKEEHKL FLTRVLIPLH KLKCLPNYHQ
301: QLSYCVIQFV EKDCKLADTV IRGMLKYWPV TNSAKEIMFL NELEEILEAT QLTEFERCMV PLSRQIAQCL SSSHFQVAER ALYLWNNDHV TNLVRQNSRI
401: ILPIVFPALE KNGSSHWNQA VKNLTENVLK VLSDTNPDLF EECLHKFQED QQKAEDTKKK NGETWRQLEE IVASMAK
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.