Factsheet for AT3G26020.4

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

nucleus 2
plastid 3
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
ChloroP:	plastid
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX83578	Canola	cytosol	83.93	92.12
Bra025178.1-P	Field mustard	cytosol, plastid	82.61	87.4
CDY13605	Canola	cytosol, plastid	83.93	87.23
Bra036352.1-P	Field mustard	cytosol, plastid	82.23	82.23
AT1G13460.2	Thale cress	cytosol, plastid	75.61	81.3
Solyc05g014340.2.1	Tomato	cytosol	64.27	67.73
PGSC0003DMT400045008	Potato	cytosol, plastid	63.71	67.13
KRG97478	Soybean	cytosol, plastid	65.03	66.54
KRH31415	Soybean	cytosol, plastid	65.41	66.41
VIT_01s0010g02350.t01	Wine grape	cytosol, mitochondrion, plastid	63.33	65.05
HORVU2Hr1G083850.1	Barley	cytosol	61.06	64.6
Zm00001d043447_P001	Maize	cytosol	20.79	63.95
Os04t0485100-01	Rice	plasma membrane	61.44	63.85
TraesCS2A01G320700.2	Wheat	mitochondrion	60.49	63.62
TraesCS2B01G362000.2	Wheat	cytosol, mitochondrion	60.49	63.62
TraesCS2D01G341400.3	Wheat	mitochondrion	60.49	63.62
KXG26587	Sorghum	mitochondrion	61.06	63.33
HORVU7Hr1G074840.1	Barley	mitochondrion, plastid	61.06	62.48
EER93109	Sorghum	cytosol, plastid	61.06	62.24
TraesCS7B01G214300.2	Wheat	nucleus	60.68	62.09
TraesCS7D01G310200.1	Wheat	cytosol, plastid	60.68	62.09
Os03t0844500-01	Rice	cytosol	60.68	62.09
Os08t0122000-01	Rice	plasma membrane	60.49	62.02
HORVU5Hr1G120550.1	Barley	nucleus, plastid	59.74	61.84
TraesCS7A01G313600.1	Wheat	nucleus	60.3	61.7
TraesCS4A01G341600.1	Wheat	plastid	59.55	61.64
TraesCS5B01G533000.1	Wheat	plastid	59.55	61.4
TraesCS5D01G531300.1	Wheat	plastid	59.55	61.4
OQU79819	Sorghum	cytosol	60.87	60.87
AT4G15415.5	Thale cress	cytosol, plastid	58.79	59.58
Os07t0274800-02	Rice	extracellular, plasma membrane	56.9	58.22
AT3G26030.1	Thale cress	cytosol	51.98	57.65
OQU88848	Sorghum	cytosol	54.63	57.34
HORVU0Hr1G004960.2	Barley	cytosol	53.69	57.14
AT3G09880.1	Thale cress	cytosol, plastid	52.93	56.11
AT3G21650.2	Thale cress	nucleus, plastid	57.66	55.86
AT5G03470.1	Thale cress	cytosol	50.28	53.74
GSMUA_Achr8P01190_001	Banana	cytosol, mitochondrion, nucleus, plastid	19.28	51.78
AT5G25510.1	Thale cress	cytosol, mitochondrion, plastid	48.39	51.2
AT3G54930.2	Thale cress	cytosol, plastid	47.45	50.5

Protein Annotations

Gene3D:1.25.10.10	MapMan:18.4.24.1.2.3	EntrezGene:822199	ProteinID:AEE77105.1	InterPro:ARM-like	InterPro:ARM-type_fold
ArrayExpress:AT3G26020	EnsemblPlantsGene:AT3G26020	RefSeq:AT3G26020	TAIR:AT3G26020	RefSeq:AT3G26020-TAIR-G	EnsemblPlants:AT3G26020.4
TAIR:AT3G26020.4	Unigene:At.6324	UniProt:F4JBC4	GO:GO:0000159	GO:GO:0003674	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005737	GO:GO:0005829
GO:GO:0006464	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0019538	GO:GO:0019888	GO:GO:0030234	GO:GO:0043666	GO:GO:0050790	InterPro:IPR011989
RefSeq:NP_001154648.1	PFAM:PF01603	PIRSF:PIRSF028043	PO:PO:0000013	PO:PO:0000037	PO:PO:0000084
PO:PO:0000230	PO:PO:0000293	PO:PO:0001016	PO:PO:0001017	PO:PO:0001054	PO:PO:0001078
PO:PO:0001081	PO:PO:0001185	PO:PO:0004507	PO:PO:0007064	PO:PO:0007095	PO:PO:0007098
PO:PO:0007103	PO:PO:0007115	PO:PO:0007123	PO:PO:0007611	PO:PO:0007616	PO:PO:0008019
PO:PO:0009005	PO:PO:0009006	PO:PO:0009009	PO:PO:0009010	PO:PO:0009025	PO:PO:0009029
PO:PO:0009030	PO:PO:0009031	PO:PO:0009032	PO:PO:0009046	PO:PO:0009047	PO:PO:0009052
PO:PO:0020030	PO:PO:0020038	PO:PO:0020100	PO:PO:0020137	PO:PO:0025022	PO:PO:0025195
PO:PO:0025281	InterPro:PP2A_B56	PANTHER:PTHR10257	PANTHER:PTHR10257:SF46	SUPFAM:SSF48371	UniParc:UPI0001A7B325
SEG:seg	:	:	:	:	:

Description

Protein phosphatase 2A regulatory B subunit family protein [Source:UniProtKB/TrEMBL;Acc:F4JBC4]

Coordinates

chr3:+:9513696..9516869

Molecular Weight (calculated)

60781.9 Da

IEP (calculated)

9.074

GRAVY (calculated)

-0.468

Length

529 amino acids

Sequence
(BLAST)

001: MWKQILSKLP NKKSSKHEHR GREHGGHSSS SSHTSGASTS KSTDNGAAKS HAKNASPAGK SAASDSGFKD GNLKSSGNNN NNNNNGVFTP YEALPSFKDV
101: PNTEKQNLFI KKLNLCRVVF DFTDPTKNIK EKDIKRQTLL ELVDYVNSPN GKFSEVGIQE VVRMVSANIF RTLNPQPREN KVIDALDLEE EEPSMDLAWP
201: HLQLVYELFL RFVASPETDT KLAKRYIDQS FVLRLLDLFD SEDPRERDCL KTILHRIYGK FMVHRPFIRK SINNIFYRFV FETEKHNGIA EFLEILGSII
301: NGFALPLKDE HKFVEKDCKL ADTVIRGLLK YWPVTNSSKE VMFLNELEEV LEATQPPEFQ RCMVPLFRQI ARCLNSLHFQ AISFRHTLTA LLMRSRYSLP
401: VISNEQMEEL ILRYGKYQCL GLLYSALGVA ERALFLWNNN HIENLIMQNR KVILPIIFPA LERNAQKHWN QAVHSLTLNV RKIFHDLDPE LFKECLAKFK
501: EDESKAAETE AKREATWKRL EELGVRKAS

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.