Factsheet for HORVU0Hr1G004960.2

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU2Hr1G083850.1	Barley	cytosol	80.08	79.6
TraesCS2D01G341400.3	Wheat	mitochondrion	79.28	78.33
TraesCS2A01G320700.2	Wheat	mitochondrion	79.07	78.13
TraesCS2B01G362000.2	Wheat	cytosol, mitochondrion	78.87	77.93
Os04t0485100-01	Rice	plasma membrane	74.45	72.69
KXG26587	Sorghum	mitochondrion	73.64	71.76
Zm00001d003256_P001	Maize	cytosol, mitochondrion	73.24	71.37
Zm00001d025714_P001	Maize	mitochondrion	72.03	70.2
CDX98102	Canola	cytosol, plastid	59.56	63.93
VIT_14s0171g00530.t01	Wine grape	cytosol, plastid	50.1	61.33
Bra025178.1-P	Field mustard	cytosol, plastid	61.37	61.0
Solyc05g014340.2.1	Tomato	cytosol	61.57	60.96
PGSC0003DMT400045008	Potato	cytosol, plastid	61.37	60.76
VIT_01s0010g02350.t01	Wine grape	cytosol, mitochondrion, plastid	62.78	60.58
VIT_14s0219g00010.t01	Wine grape	cytosol	15.69	60.47
Solyc02g067980.2.1	Tomato	nucleus	63.58	60.31
AT1G13460.2	Thale cress	cytosol, plastid	59.56	60.16
Bra019720.1-P	Field mustard	plastid	59.56	60.04
HORVU7Hr1G074840.1	Barley	mitochondrion, plastid	62.37	59.96
CDY30030	Canola	plastid	59.56	59.68
Solyc02g093800.2.1	Tomato	plastid	62.78	59.66
PGSC0003DMT400052115	Potato	plastid	62.17	59.42
PGSC0003DMT400017950	Potato	plastid	62.37	59.16
KRG97478	Soybean	cytosol, plastid	61.17	58.8
HORVU5Hr1G120550.1	Barley	nucleus, plastid	60.36	58.71
CDX83578	Canola	cytosol	56.74	58.51
KRH57624	Soybean	cytosol, mitochondrion	62.78	58.43
KRH31415	Soybean	cytosol, plastid	61.17	58.35
KRG94414	Soybean	plastid	61.37	58.32
Bra036352.1-P	Field mustard	cytosol, plastid	61.77	58.03
HORVU3Hr1G022550.2	Barley	cytosol	45.07	58.03
KRG94343	Soybean	cytosol, plastid	61.77	57.28
HORVU4Hr1G003930.1	Barley	cytosol, peroxisome	51.31	56.79
CDY13605	Canola	cytosol, plastid	56.54	55.21
AT3G26020.4	Thale cress	cytosol, plastid	57.14	53.69
HORVU1Hr1G025690.4	Barley	cytosol, mitochondrion	45.67	46.71
PGSC0003DMT400034814	Potato	cytosol	19.72	46.45
CDY50168	Canola	cytosol	14.08	43.48
HORVU1Hr1G084450.3	Barley	plastid	47.08	37.99
HORVU5Hr1G084630.1	Barley	cytosol	29.78	31.69

Protein Annotations

Gene3D:1.25.10.10	MapMan:18.4.24.1.2.3	UniProt:A0A287DVY1	InterPro:ARM-like	InterPro:ARM-type_fold	GO:GO:0000159
GO:GO:0003674	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0006464
GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0019538
GO:GO:0019888	GO:GO:0030234	GO:GO:0043666	EnsemblPlantsGene:HORVU0Hr1G004960	EnsemblPlants:HORVU0Hr1G004960.2	InterPro:IPR011989
PFAM:PF01603	PIRSF:PIRSF028043	InterPro:PP2A_B56	PANTHER:PTHR10257	PANTHER:PTHR10257:SF46	SUPFAM:SSF48371
UniParc:UPI000B482E33	SEG:seg	:	:	:	:

Description

Serine/threonine protein phosphatase 2A regulatory subunit [Source:UniProtKB/TrEMBL;Acc:A0A287DVY1]

Coordinates

chrchrUn:+:28245198..28247881

Molecular Weight (calculated)

46443.2 Da

IEP (calculated)

6.654

GRAVY (calculated)

-0.273

Length

497 amino acids

Sequence
(BLAST)

001: XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXA
101: DPTKNLKEKE MKRQTLMELV DYVTSANGKF SEVIMLEISK MVAINLFRSS NPTPRENKAI EGVDMEEEEP LMDPAWSHLQ IVYEVFLRFV ASQETDAKLA
201: KRYIDHSFIL KLLDLFDSED PRERDYLKTI LHRIYGKFMV HRPFIRKAIN NIFYRFIFET EKHNGIAELL EILGSIINGF ALPLKEEHKL FLLRALIPLH
301: KPKCVAMYHQ QLSYCITQFV EKDCKLADTV IRGLLKYWPI TNSSKEVMFL GELEEVLEAT QLAEFQRCMV PLFRQIASSM NSSHFQVAER ALFLWNNDHI
401: ENLIKQNYKV ILPIIFPALE RNARGHWNQA VRSLTLNVRK IFTDHDSTFF GECMQKFDDD ELKQEESSSK REALWKRLEE MGSESNPSGI PNGKSNQ

Best Arabidopsis Sequence Match ( AT1G13460.1 )
(BLAST)

001: MWKQILSKLP KKSSSKNHSS SSSSTSKSSD NGASKSGNSQ TQNAPPVKPS ADSGFKEGNL KGNGNGFTPY EALPGFKDVP NAEKQNLFVR KLSLCCVVFD
101: FSDPTKNVKE KDIKRQTLLE LVDYVASPNG KFSETVIQEV VRMVSVNIFR TLNPQPRENK VIDALDLEEE EPSMDPTWPH LQLVYEILLR LIASPETDTK
201: LAKKYIDQSF VSRLLDLFDS EDPRERDCLK TVLHRIYGKF MVHRPFIRKS INNIFYRFVF ETEKHNGIAE FLEILGSIIN GFALPLKDEH KVFLVRALVP
301: LHKPKSLQMY HQQLSYCITQ FVEKDCKLAD TVIRGLLKSW PVTNSSKEVM FLNELEEVLE ATQPPEFQRC MVPLFRQVAR CLNSLHFQVA ERALFLWNND
401: HIENLIMQNR KVILPIIFPA LERNTQKHWN QAVHSLTLNV QKIFNDIDAE LFKDCLAKFR EDESKEAEIG AKREATWKRL EEIGNQKQKS SL

Arabidopsis Description

B'THETASerine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' theta isoform [Source:UniProtKB/Swiss-Prot;Acc:Q8LF36]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.