Factsheet for HORVU1Hr1G025690.4

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

nucleus 1
plastid 2
cytosol 3
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1A01G118300.2	Wheat	cytosol, mitochondrion	98.56	98.56
TraesCS1D01G119400.1	Wheat	cytosol, mitochondrion	98.56	98.56
TraesCS1B01G138000.1	Wheat	cytosol, mitochondrion	97.53	97.53
HORVU3Hr1G022550.2	Barley	cytosol	67.49	84.97
EES19134	Sorghum	plastid	84.36	84.71
Zm00001d037626_P001	Maize	plastid	83.33	83.33
Os05t0178400-01	Rice	plasma membrane	83.33	82.48
CDX87083	Canola	cytosol	44.65	61.65
CDY54903	Canola	mitochondrion, plastid	54.12	54.12
VIT_04s0008g04270.t01	Wine grape	mitochondrion	54.73	54.06
CDY05497	Canola	mitochondrion, plastid	53.7	53.81
Bra020504.1-P	Field mustard	mitochondrion, plastid	53.5	53.39
AT5G25510.1	Thale cress	cytosol, mitochondrion, plastid	54.53	53.0
VIT_11s0016g04500.t01	Wine grape	cytosol	58.02	52.81
KRH61853	Soybean	plastid	53.7	52.62
KRH52526	Soybean	cytosol	53.7	52.52
KRH05059	Soybean	cytosol, mitochondrion, plastid	53.09	52.44
HORVU4Hr1G003930.1	Barley	cytosol, peroxisome	48.35	52.34
KRH16045	Soybean	cytosol, mitochondrion, plastid	52.88	52.24
Bra009846.1-P	Field mustard	plastid	52.67	51.72
CDX80521	Canola	plastid	52.47	51.41
PGSC0003DMT400067211	Potato	cytosol, plastid	52.67	51.41
Solyc06g065690.2.1	Tomato	cytosol, plastid	52.67	51.41
CDX88186	Canola	cytosol, plastid	52.26	51.31
KRH56674	Soybean	cytosol	53.29	50.29
KRH03791	Soybean	cytosol	52.47	49.61
HORVU2Hr1G083850.1	Barley	cytosol	50.62	49.2
Solyc12g006920.1.1	Tomato	plastid	51.03	49.01
PGSC0003DMT400002753	Potato	plastid	50.41	48.42
HORVU7Hr1G074840.1	Barley	mitochondrion, plastid	51.23	48.16
HORVU5Hr1G120550.1	Barley	nucleus, plastid	50.0	47.55
HORVU0Hr1G004960.2	Barley	cytosol	46.71	45.67
HORVU1Hr1G084450.3	Barley	plastid	57.41	45.29
HORVU5Hr1G084630.1	Barley	cytosol	31.07	32.33

Protein Annotations

Gene3D:1.25.10.10	MapMan:18.4.24.1.2.3	EMBL:AK354999	InterPro:ARM-like	InterPro:ARM-type_fold	ncoils:Coil
UniProt:F2CTP7	GO:GO:0000159	GO:GO:0003674	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0006464	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0019538	GO:GO:0019888	GO:GO:0030234	GO:GO:0043666	GO:GO:0050790
EnsemblPlantsGene:HORVU1Hr1G025690	EnsemblPlants:HORVU1Hr1G025690.4	InterPro:IPR011989	PFAM:PF01603	PIRSF:PIRSF028043	InterPro:PP2A_B56
PANTHER:PTHR10257	PANTHER:PTHR10257:SF16	SUPFAM:SSF48371	UniParc:UPI0002004DCA	SEG:seg	:

Description

Predicted protein [Source:UniProtKB/TrEMBL;Acc:F2CTP7]

Coordinates

chrchr1H:+:126940575..126946720

Molecular Weight (calculated)

55666.5 Da

IEP (calculated)

8.319

GRAVY (calculated)

-0.250

Length

486 amino acids

Sequence
(BLAST)

001: MWKQFLGKLS GKSPKSGGGG GWGSPPPKSP TSYDVNGRQW DSMRASPPLA AIAGAEGETR EDVFLRKLNV CCVLFDFSND RGRDSPERER KRQVLMSLVD
101: CLGTAEEPLT EAMVSACVRM FAINLFRVFP PKVRPGTGAA AEADEDDPFF DPSWYHLQVV YELLLRFVTS PVVDVKVARK YLDNSFISRL LDLLDSDDPR
201: ERDCLKTVLH RIYGKFMGNR PFIRKAVSNI FYRFVSDADR HNGIGELLEV FGSVISGFAK PLKEEHKLFL WKALIPLHKP KTVGMYLPQL TYCITQFIDK
301: EPKLSGTVIR GLLKYWPVTN SQKEMMFLGE LEEVLELTEM PEFQKCMVPL FRRVAHCLNS SHFQVAERAL FLWNNEHLFG LISQNHQVIL PIIYPALERN
401: ARLHWNQSVL NITMNVRKMF FDMDQKLLLA CQKNLQEEEE KQAASEERRR LIWEHLERNA AFHPVTRDIS FAAFPKPAPL VAPTMT

Best Arabidopsis Sequence Match ( AT1G13460.1 )
(BLAST)

001: MWKQILSKLP KKSSSKNHSS SSSSTSKSSD NGASKSGNSQ TQNAPPVKPS ADSGFKEGNL KGNGNGFTPY EALPGFKDVP NAEKQNLFVR KLSLCCVVFD
101: FSDPTKNVKE KDIKRQTLLE LVDYVASPNG KFSETVIQEV VRMVSVNIFR TLNPQPRENK VIDALDLEEE EPSMDPTWPH LQLVYEILLR LIASPETDTK
201: LAKKYIDQSF VSRLLDLFDS EDPRERDCLK TVLHRIYGKF MVHRPFIRKS INNIFYRFVF ETEKHNGIAE FLEILGSIIN GFALPLKDEH KVFLVRALVP
301: LHKPKSLQMY HQQLSYCITQ FVEKDCKLAD TVIRGLLKSW PVTNSSKEVM FLNELEEVLE ATQPPEFQRC MVPLFRQVAR CLNSLHFQVA ERALFLWNND
401: HIENLIMQNR KVILPIIFPA LERNTQKHWN QAVHSLTLNV QKIFNDIDAE LFKDCLAKFR EDESKEAEIG AKREATWKRL EEIGNQKQKS SL

Arabidopsis Description

B'THETASerine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' theta isoform [Source:UniProtKB/Swiss-Prot;Acc:Q8LF36]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.