Factsheet for Os05t0178400-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
cytosol 2
plastid 2
mitochondrion 3

Predictors

GFP

MS/MS

Papers

plasma membrane: 28056797

msms PMID: 28056797 doi

N Yang, T Wang

Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China., Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China. twang@ibcas.ac.cn.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES19134	Sorghum	plastid	87.37	88.64
Zm00001d037626_P001	Maize	plastid	85.34	86.21
TraesCS1D01G119400.1	Wheat	cytosol, mitochondrion	83.5	84.36
TraesCS1A01G118300.2	Wheat	cytosol, mitochondrion	82.89	83.74
HORVU1Hr1G025690.4	Barley	cytosol, mitochondrion	82.48	83.33
TraesCS1B01G138000.1	Wheat	cytosol, mitochondrion	81.67	82.51
Os01t0178400-01	Rice	cytosol	34.42	82.44
CDX87083	Canola	cytosol	45.42	63.35
VIT_04s0008g04270.t01	Wine grape	mitochondrion	56.21	56.1
KRH61853	Soybean	plastid	55.4	54.84
KRH52526	Soybean	cytosol	55.4	54.73
KRH05059	Soybean	cytosol, mitochondrion, plastid	54.79	54.67
KRH16045	Soybean	cytosol, mitochondrion, plastid	54.79	54.67
VIT_11s0016g04500.t01	Wine grape	cytosol	58.66	53.93
AT5G25510.1	Thale cress	cytosol, mitochondrion, plastid	54.79	53.8
Bra009846.1-P	Field mustard	plastid	54.18	53.74
CDY05497	Canola	mitochondrion, plastid	52.95	53.61
CDX88186	Canola	cytosol, plastid	53.77	53.33
CDY54903	Canola	mitochondrion, plastid	52.75	53.29
CDX80521	Canola	plastid	53.56	53.02
Bra020504.1-P	Field mustard	mitochondrion, plastid	52.34	52.77
Solyc06g065690.2.1	Tomato	cytosol, plastid	52.95	52.21
PGSC0003DMT400067211	Potato	cytosol, plastid	52.75	52.01
KRH56674	Soybean	cytosol	52.55	50.1
Solyc12g006920.1.1	Tomato	plastid	51.53	50.0
KRH03791	Soybean	cytosol	52.34	50.0
PGSC0003DMT400002753	Potato	plastid	51.12	49.6
Os08t0122000-01	Rice	plasma membrane	51.93	49.42
Os04t0485100-01	Rice	plasma membrane	50.92	49.12
Os03t0844500-01	Rice	cytosol	51.32	48.74
Os05t0555100-01	Rice	plastid	43.79	47.88
Os03t0681800-00	Rice	plasma membrane	52.14	47.85
Os07t0274800-02	Rice	extracellular, plasma membrane	48.27	45.84
Os09t0542700-00	Rice	cytosol	31.98	32.57

Protein Annotations

Gene3D:1.25.10.10	MapMan:18.4.24.1.2.3	EntrezGene:4337970	ProteinID:AAT77357.1	EMBL:AK102847	InterPro:ARM-like
InterPro:ARM-type_fold	ProteinID:BAF16713.1	ProteinID:BAS92537.1	GO:GO:0000159	GO:GO:0003674	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0006464	GO:GO:0007154	GO:GO:0007165
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0019538	GO:GO:0019888	GO:GO:0030234
GO:GO:0043666	InterPro:IPR011989	EnsemblPlantsGene:Os05g0178400	EnsemblPlants:Os05t0178400-01	PFAM:PF01603	PIRSF:PIRSF028043
InterPro:PP2A_B56	PANTHER:PTHR10257	PANTHER:PTHR10257:SF16	UniProt:Q6AT11	SUPFAM:SSF48371	UniParc:UPI00003FE719
RefSeq:XP_015640697.1	SEG:seg	:	:	:	:

Description

Similar to Protein phosphatase 2A B'kappa subunit. (Os05t0178400-01)

Coordinates

chr5:-:4669135..4672258

Molecular Weight (calculated)

55389.1 Da

IEP (calculated)

7.960

GRAVY (calculated)

-0.171

Length

491 amino acids

Sequence
(BLAST)

001: MWKQFLGKIS WKAPKSGGGG GGSPTAKSPL SKGAGNGEPP APPAAAAGGG GGAEGETRED VFLRKLNVCC VVFDFSSAAA AAAAERGRDS PERERKRQVL
101: VSLVDCVGAA EEPLTEAMIS GCVRMFAINL FRVFPPKVRS GAAGAAEADE DEPFFDPSWY HLQAVYELLL RFVMSPVVDV KIARKYMDNS FVSRLLDLFD
201: SDDPRERECL KTVLHRIYGK FMGNRPFIRK AVSNIFYRFV FETDRHNGIA ELLEVFGSVI SGFAKPLKEE HKLFLWKALV PLHKPKTVGV YLPQLTYCII
301: QFIEKEPKLA GTVIRGLLKY WPVTNSQKEM MFLGELEEVL ELTEMAEFQK CMVPLFRRIA HCLNSSHFQV AERALFLWNN EHLFDLISQN RQTIMPIIYP
401: ALERNTRWHW NQSVLNVTMN VRKMFLEMDE GLLLTCQRNF QEEEEKRAAS EERRKLIWEN LERNASFRPV TGDIGFSVLP ASAPLVAPTM T

Best Arabidopsis Sequence Match ( AT1G13460.1 )
(BLAST)

001: MWKQILSKLP KKSSSKNHSS SSSSTSKSSD NGASKSGNSQ TQNAPPVKPS ADSGFKEGNL KGNGNGFTPY EALPGFKDVP NAEKQNLFVR KLSLCCVVFD
101: FSDPTKNVKE KDIKRQTLLE LVDYVASPNG KFSETVIQEV VRMVSVNIFR TLNPQPRENK VIDALDLEEE EPSMDPTWPH LQLVYEILLR LIASPETDTK
201: LAKKYIDQSF VSRLLDLFDS EDPRERDCLK TVLHRIYGKF MVHRPFIRKS INNIFYRFVF ETEKHNGIAE FLEILGSIIN GFALPLKDEH KVFLVRALVP
301: LHKPKSLQMY HQQLSYCITQ FVEKDCKLAD TVIRGLLKSW PVTNSSKEVM FLNELEEVLE ATQPPEFQRC MVPLFRQVAR CLNSLHFQVA ERALFLWNND
401: HIENLIMQNR KVILPIIFPA LERNTQKHWN QAVHSLTLNV QKIFNDIDAE LFKDCLAKFR EDESKEAEIG AKREATWKRL EEIGNQKQKS SL

Arabidopsis Description

B'THETASerine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' theta isoform [Source:UniProtKB/Swiss-Prot;Acc:Q8LF36]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.