Factsheet for Zm00001d037626_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 3
cytosol 1
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES19134	Sorghum	plastid	96.5	96.9
Os05t0178400-01	Rice	plasma membrane	86.21	85.34
TraesCS1D01G119400.1	Wheat	cytosol, mitochondrion	84.36	84.36
TraesCS1A01G118300.2	Wheat	cytosol, mitochondrion	83.74	83.74
HORVU1Hr1G025690.4	Barley	cytosol, mitochondrion	83.33	83.33
TraesCS1B01G138000.1	Wheat	cytosol, mitochondrion	82.51	82.51
Zm00001d039625_P001	Maize	mitochondrion, plastid	77.78	76.06
CDX87083	Canola	cytosol	45.06	62.22
Zm00001d043447_P001	Maize	cytosol	19.75	55.81
Zm00001d038944_P003	Maize	plastid	57.0	55.29
VIT_04s0008g04270.t01	Wine grape	mitochondrion	55.97	55.28
KRH61853	Soybean	plastid	56.38	55.24
KRH52526	Soybean	cytosol	56.38	55.13
KRH05059	Soybean	cytosol, mitochondrion, plastid	55.56	54.88
KRH16045	Soybean	cytosol, mitochondrion, plastid	55.56	54.88
CDY05497	Canola	mitochondrion, plastid	54.53	54.64
AT5G25510.1	Thale cress	cytosol, mitochondrion, plastid	56.17	54.6
CDY54903	Canola	mitochondrion, plastid	54.53	54.53
Bra020504.1-P	Field mustard	mitochondrion, plastid	54.12	54.0
VIT_11s0016g04500.t01	Wine grape	cytosol	59.05	53.75
Bra009846.1-P	Field mustard	plastid	54.73	53.74
CDX80521	Canola	plastid	54.53	53.43
CDX88186	Canola	cytosol, plastid	54.32	53.33
Solyc06g065690.2.1	Tomato	cytosol, plastid	54.32	53.01
PGSC0003DMT400067211	Potato	cytosol, plastid	54.32	53.01
Zm00001d035140_P002	Maize	plastid	53.5	51.38
Zm00001d049642_P001	Maize	cytosol, plastid	52.88	51.2
KRH56674	Soybean	cytosol	53.91	50.87
Zm00001d003256_P001	Maize	cytosol, mitochondrion	52.88	50.39
KRH03791	Soybean	cytosol	53.29	50.39
Solyc12g006920.1.1	Tomato	plastid	51.85	49.8
Zm00001d025714_P001	Maize	mitochondrion	52.06	49.61
PGSC0003DMT400002753	Potato	plastid	51.65	49.6
Zm00001d009500_P002	Maize	plastid	49.38	48.0
Zm00001d013544_P002	Maize	cytosol, plastid	51.23	47.61
Zm00001d033370_P001	Maize	plastid	52.06	45.75
Zm00001d005501_P001	Maize	cytosol	47.94	43.31
Zm00001d019363_P001	Maize	cytosol	46.91	42.3
Zm00001d034817_P001	Maize	cytosol	51.23	41.92
Zm00001d049469_P001	Maize	mitochondrion	13.99	37.36
Zm00001d006254_P001	Maize	cytosol	33.74	35.42

Protein Annotations

Gene3D:1.25.10.10	EntrezGene:103630073	MapMan:18.4.24.1.2.3	UniProt:A0A1D6LZH5	ProteinID:AQK84491.1	InterPro:ARM-like
InterPro:ARM-type_fold	GO:GO:0000159	GO:GO:0003674	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0006464	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0019538	GO:GO:0019888	GO:GO:0030234	GO:GO:0043666	GO:GO:0050790
InterPro:IPR011989	PFAM:PF01603	PIRSF:PIRSF028043	InterPro:PP2A_B56	PANTHER:PTHR10257	PANTHER:PTHR10257:SF16
SUPFAM:SSF48371	UniParc:UPI0002216A97	EnsemblPlantsGene:Zm00001d037626	EnsemblPlants:Zm00001d037626_P001	EnsemblPlants:Zm00001d037626_T001	SEG:seg

Description

Serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' iota isoform

Coordinates

chr6:+:132302357..132311438

Molecular Weight (calculated)

55395.1 Da

IEP (calculated)

8.262

GRAVY (calculated)

-0.182

Length

486 amino acids

Sequence
(BLAST)

001: MWKQFLGKIS RKSPKSGGRG GSRPAKSPSS RGAANGAPPE LSASSPAAAA SPFPPPSGAE TREDVFLRKL NVCCVVFDFA AERGKDSPEV ERKRQVLVSL
101: VDCVSEAEEP LTEAMLSACV RMFAINLFRV FPPKLRSGAS AATDEDEPFF DPSWYHLQVV YELLLRFVMS PVVDVKVARK YMDNSFISRL LDLFDSDDPR
201: ERECLKTVLH RIYGKFMGNR PFIRKAVSNI FYRFVFETDH HNGIAELLEV FGSVITGFAK PLKEEHKLFL WKALIPLHKP KTVGVYLPQL TYCITQFIEK
301: EPKLTGTVIR GLLKYWPVTN SQKEMMFLGE LEEVLELTEM ADFQKCAVPL FRRIAQCLNS SHFQVAERAL FLWNNEHLFD LISQNCQVIL PIIYPALERN
401: ARWHWNQSVL NVTMNVRKMF FDMDERLLLA CQTNFQEEEK KRAASEERRR LVWEHLERNA AFHPVTGDIG FAVPPTSAPL VAPTMT

Best Arabidopsis Sequence Match ( AT4G15415.1 )
(BLAST)

001: MIKQIFGKLP RKPSKSSHND SNPNGEGGVN SYYIPNSGIS SISKPSSKSS ASNSNGANGT VIAPSSTSSN RTNQVNGVYE ALPSFRDVPT SEKPNLFIKK
101: LSMCCVVFDF NDPSKNLREK EIKRQTLLEL VDYIATVSTK LSDAAMQEIA KVAVVNLFRT FPSANHESKI LETLDVDDEE PALEPAWPHL QVVYELLLRF
201: VASPMTDAKL AKRYIDHSFV LKLLDLFDSE DQREREYLKT ILHRIYGKFM VHRPFIRKAI NNIFYRFIFE TEKHNGIAEL LEILGSIING FALPLKEEHK
301: LFLIRALIPL HRPKCASAYH QQLSYCIVQF VEKDFKLADT VIRGLLKYWP VTNSSKEVMF LGELEEVLEA TQAAEFQRCM VPLFRQIARC LNSSHFQVAE
401: RALFLWNNDH IRNLITQNHK VIMPIVFPAM ERNTRGHWNQ AVQSLTLNVR KVMAETDQIL FDECLAKFQE DEANETEVVA KREATWKLLE ELAASKSVSN
501: EAVLVPRFSS SVTLATGKTS GS

Arabidopsis Description

B'GAMMASerine/threonine protein phosphatase 2A 59 kDa regulatory subunit B' gamma isoform [Source:UniProtKB/Swiss-Prot;Acc:Q8RW96]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.