Factsheet for Zm00001d034817_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER93109	Sorghum	cytosol, plastid	82.83	94.8
Os03t0844500-01	Rice	cytosol	75.59	86.85
TraesCS5D01G531300.1	Wheat	plastid	71.89	83.24
TraesCS4A01G341600.1	Wheat	plastid	71.55	83.17
TraesCS5B01G533000.1	Wheat	plastid	71.72	83.04
HORVU5Hr1G120550.1	Barley	nucleus, plastid	71.38	82.97
GSMUA_Achr8P08980_001	Banana	cytosol, mitochondrion	55.56	75.17
Zm00001d043447_P001	Maize	cytosol	21.04	72.67
Zm00001d035140_P002	Maize	plastid	60.77	71.34
GSMUA_Achr8P32030_001	Banana	cytosol	57.07	70.48
Zm00001d049642_P001	Maize	cytosol, plastid	58.75	69.52
GSMUA_Achr5P25450_001	Banana	cytosol, mitochondrion, nucleus, plastid	56.73	69.06
Zm00001d003256_P001	Maize	cytosol, mitochondrion	59.09	68.82
GSMUA_AchrUn_...	Banana	cytosol	30.3	68.18
Zm00001d025714_P001	Maize	mitochondrion	58.08	67.65
Zm00001d005501_P001	Maize	cytosol	57.91	63.94
Zm00001d019363_P001	Maize	cytosol	57.91	63.82
Zm00001d038944_P003	Maize	plastid	45.79	54.29
Zm00001d013544_P002	Maize	cytosol, plastid	46.97	53.35
Zm00001d037626_P001	Maize	plastid	41.92	51.23
Zm00001d033370_P001	Maize	plastid	47.64	51.18
Zm00001d039625_P001	Maize	mitochondrion, plastid	42.26	50.5
Zm00001d009500_P002	Maize	plastid	40.57	48.2
Zm00001d049469_P001	Maize	mitochondrion	12.79	41.76
Zm00001d006254_P001	Maize	cytosol	28.45	36.5

Protein Annotations

Gene3D:1.25.10.10	MapMan:18.4.24.1.2.3	EntrezGene:732821	UniProt:A0A1D6LBN4	InterPro:ARM-like	InterPro:ARM-type_fold
ncoils:Coil	GO:GO:0000159	GO:GO:0003674	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0006464	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0019538	GO:GO:0019888	GO:GO:0030234	GO:GO:0043666	GO:GO:0050790
InterPro:IPR011989	ProteinID:ONM11513.1	PFAM:PF01603	PIRSF:PIRSF028043	InterPro:PP2A_B56	PANTHER:PTHR10257
PANTHER:PTHR10257:SF46	SUPFAM:SSF48371	UniParc:UPI00084462C4	EnsemblPlantsGene:Zm00001d034817	EnsemblPlants:Zm00001d034817_P001	EnsemblPlants:Zm00001d034817_T001
SEG:seg	:	:	:	:	:

Description

Serine/threonine protein phosphatase 2A 59 kDa regulatory subunit B' eta isoform

Coordinates

chr1:+:302864305..302869511

Molecular Weight (calculated)

67201.7 Da

IEP (calculated)

8.874

GRAVY (calculated)

-0.353

Length

594 amino acids

Sequence
(BLAST)

001: MRGGASAVNE RSLDPERRRK WPYVPGLAEA GVLHSPGLAQ ISVQATASAI RKPTSVVSEV FQVSVGWRCY CGCDNMIKQF LGRLPKKPSK SGDKDPIGRP
101: SPSVSHQPLG PRAGDRATNL SSHPPVISSS GLSYGSGMHV GNAYTKAHVN GDSAASAFRS LPSFKDVPNT EKQNLFNEKL NLCCAQFDFT DPTKNIKEKE
201: IKRQTLVELV DYIASASGKF SEASMQEITK MVSANLFRTL STPPRDNKVD GFDVDEEEPV MDPAWPHLQI VYELFLRFIQ SQETDAKLAK RYIDHSFVLR
301: LLDLFDSEDP REREYLKMIL HRVYGKFMVH RPYIRKAINN IFYQFIYETE KHNGIAELLE ILGSIINGFA LPLKEEHKLF LVRALIPLHK PKCIAMYHQQ
401: LSYCITQFVE KDCKLADTVI RGLLKYWPIT NSSKEVLFLG ELEEILEATQ PAEFQKCMVP LFRQIARCLN SSHFQVAERA LFLWNNDHIE SLIKQNSRVI
501: LPIIFPALER NASGHWNQAV QSLTLNVRKL FSDNDPGLFT ESLRKYEEEK AREKEVKSKQ EATWRRLEEM ASAKATSGAA VLVSRPLSRQ SSAV

Best Arabidopsis Sequence Match ( AT3G26020.6 )
(BLAST)

001: MWKQILSKLP NKKSSKHEHR GREHGGHSSS SSHTSGASTS KSTDNGAAKS HAKNASPAGK SAASDSGFKD GNLKSSGNNN NNNNNGVFTP YEALPSFKDV
101: PNTEKQNLFI KKLNLCRVVF DFTDPTKNIK EKDIKRQTLL ELVDYVNSPN GKFSEVGIQE VVRMVSANIF RTLNPQPREN KVIDALDLEE EEPSMDLAWP
201: HLQLVYELFL RFVASPETDT KLAKRYIDQS FVLRLLDLFD SEDPRERDCL KTILHRIYGK FMVHRPFIRK SINNIFYRFV FETEKHNGIA EFLEILGSII
301: NGFALPLKDE HKVFLVRVLI PLHKPKCLQM YHQQLSYCIT QFVEKDCKLA DTVIRGLLKY WPVTNSSKEV MFLNELEEVL EATQPPEFQR CMVPLFRQIA
401: RCLNSLHFQV AERALFLWNN NHIENLIMQN RKVILPIIFP ALERNAQKHW NQAVHSLTLN VRKIFHDLDP ELFKECLAKF KEDESKAAET EAKREATWKR
501: LEELGVRKAS

Arabidopsis Description

Protein phosphatase 2A regulatory B subunit family protein [Source:UniProtKB/TrEMBL;Acc:F4JBC4]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.