Factsheet for Zm00001d005501_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU88848	Sorghum	cytosol	87.36	93.25
Zm00001d019363_P001	Maize	cytosol	88.85	88.68
Os07t0274800-02	Rice	extracellular, plasma membrane	71.0	73.89
GSMUA_Achr8P08980_001	Banana	cytosol, mitochondrion	52.79	64.69
Zm00001d043447_P001	Maize	cytosol	20.63	64.53
GSMUA_Achr8P32030_001	Banana	cytosol	56.51	63.2
GSMUA_AchrUn_...	Banana	cytosol	30.11	61.36
Zm00001d035140_P002	Maize	plastid	57.25	60.87
Zm00001d049642_P001	Maize	cytosol, plastid	56.51	60.56
GSMUA_Achr5P25450_001	Banana	cytosol, mitochondrion, nucleus, plastid	54.28	59.84
Zm00001d003256_P001	Maize	cytosol, mitochondrion	56.32	59.41
Zm00001d025714_P001	Maize	mitochondrion	55.39	58.43
Zm00001d034817_P001	Maize	cytosol	63.94	57.91
Zm00001d038944_P003	Maize	plastid	45.91	49.3
Zm00001d013544_P002	Maize	cytosol, plastid	47.77	49.14
Zm00001d037626_P001	Maize	plastid	43.31	47.94
Zm00001d033370_P001	Maize	plastid	48.7	47.38
Zm00001d039625_P001	Maize	mitochondrion, plastid	42.94	46.48
Zm00001d009500_P002	Maize	plastid	41.45	44.6
Zm00001d049469_P001	Maize	mitochondrion	12.45	36.81
Zm00001d006254_P001	Maize	cytosol	30.67	35.64

Protein Annotations

Gene3D:1.25.10.10	MapMan:18.4.24.1.2.3	UniProt:A0A1D6ENF4	InterPro:ARM-like	InterPro:ARM-type_fold	GO:GO:0000159
GO:GO:0003674	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0006464
GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0019538
GO:GO:0019888	GO:GO:0030234	GO:GO:0043666	GO:GO:0050790	InterPro:IPR011989	ProteinID:ONM21332.1
PFAM:PF01603	PIRSF:PIRSF028043	InterPro:PP2A_B56	PANTHER:PTHR10257	PANTHER:PTHR10257:SF18	SUPFAM:SSF48371
UniParc:UPI0008428528	EnsemblPlantsGene:Zm00001d005501	EnsemblPlants:Zm00001d005501_P001	EnsemblPlants:Zm00001d005501_T001	SEG:seg	:

Description

Serine/threonine protein phosphatase 2A 59 kDa regulatory subunit B' eta isoform

Coordinates

chr2:+:176332667..176339735

Molecular Weight (calculated)

61762.0 Da

IEP (calculated)

8.065

GRAVY (calculated)

-0.248

Length

538 amino acids

Sequence
(BLAST)

001: MMMGACHGSQ DLNPIGIDSG GVSCSGWGSM MKQIFGRRKA SKTAGKECGG RTFNQLLSGS GFADLSGQLP ILSSTGDIYG NGNRTGFQDS RINDTLFSSN
101: FRLLPSFKDV PNTEKQNLLI KKLNMCCTLF DFEDAAKNIK EKEIKTLMLL EIDEYVRTAN AKFPEIIVEA ITKMISVNLF RTLISPPREK KVLQAFDLEE
201: DEPLMDPAWP HLYHVYELLL TFVQSPENDA KLAKKYIDHS FILRLLELFD SEDARERDRL KTVLHRIYGK FMVYRPFIRK AINNIFYQFI YETEKHNGIA
301: ELLEIFGSII NGFALPLKEE HKLFLGRTLI PLHKPRCTSM YHRQLSYCIT QFVEKDCKLA DTVIRGLIKY WPITNSTKEV LFLGELEEVL DATQPAEFQK
401: CMVPLSHQIA HCLNSSHFQV AERVLFFWNN IHFENFVKQN SKVILPIILP ALEKNINGHW NQVVQSLSLN VRKLLSDRDP QMFTECLRKY EEDKGREKEF
501: KLKQELAWKR LDEIASAKVT SGEAVLVSPT LPRQPSFL

Best Arabidopsis Sequence Match ( AT3G26020.1 )
(BLAST)

001: MWKQILSKLP NKKSSKHEHR GREHGGHSSS SSHTSGASTS KSTDNGAAKS HAKNASPAGK SAASDSGFKD GNLKSSGNNN NNNNNGVFTP YEALPSFKDV
101: PNTEKQNLFI KKLNLCRVVF DFTDPTKNIK EKDIKRQTLL ELVDYVNSPN GKFSEVGIQE VVRMVSANIF RTLNPQPREN KVIDALDLEE EEPSMDLAWP
201: HLQLVYELFL RFVASPETDT KLAKRYIDQS FVLRLLDLFD SEDPRERDCL KTILHRIYGK FMVHRPFIRK SINNIFYRFV FETEKHNGIA EFLEILGSII
301: NGFALPLKDE HKVFLVRVLI PLHKPKCLQM YHQQLSYCIT QFVEKDCKLA DTVIRGLLKY WPVTNSSKEV MFLNELEEVL EATQPPEFQR CMVPLFRQIA
401: RCLNSLHFQV AERALFLWNN NHIENLIMQN RKVILPIIFP ALERNAQKHW NQAVHSLTLN VRKIFHDLDP ELFKECLAKF KEDESKAAET EAKREATWKR
501: LEELGVRKAS

Arabidopsis Description

Protein phosphatase 2A regulatory B subunit family protein [Source:UniProtKB/TrEMBL;Acc:F4JBC4]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.