Factsheet for Zm00001d038944_P003

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 3
mitochondrion 3
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES18643	Sorghum	plastid	96.01	96.01
Zm00001d009500_P002	Maize	plastid	84.03	84.2
TraesCS1A01G382900.2	Wheat	plastid	81.64	82.13
TraesCS1D01G390600.1	Wheat	plastid	81.84	82.0
TraesCS1B01G408600.1	Wheat	plastid	81.64	81.8
Os05t0555100-01	Rice	plastid	66.27	73.94
GSMUA_Achr2P08330_001	Banana	cytosol, mitochondrion	70.06	72.82
GSMUA_Achr6P34510_001	Banana	cytosol, plastid	55.29	70.48
GSMUA_AchrUn_...	Banana	cytosol	64.47	68.58
AT5G25510.1	Thale cress	cytosol, mitochondrion, plastid	66.67	66.8
HORVU1Hr1G084450.3	Barley	plastid	82.04	66.72
VIT_04s0008g04270.t01	Wine grape	mitochondrion	65.47	66.67
CDX87083	Canola	cytosol	46.71	66.48
KRH61853	Soybean	plastid	65.07	65.73
KRH52526	Soybean	cytosol	65.07	65.59
KRH05059	Soybean	cytosol, mitochondrion, plastid	64.07	65.24
KRH16045	Soybean	cytosol, mitochondrion, plastid	63.87	65.04
CDY05497	Canola	mitochondrion, plastid	62.87	64.95
CDY54903	Canola	mitochondrion, plastid	62.67	64.61
GSMUA_Achr8P26100_001	Banana	cytosol	61.88	64.58
Bra020504.1-P	Field mustard	mitochondrion, plastid	62.28	64.07
CDX80521	Canola	plastid	62.87	63.51
Bra009846.1-P	Field mustard	plastid	62.48	63.23
CDX88186	Canola	cytosol, plastid	62.28	63.03
PGSC0003DMT400067211	Potato	cytosol, plastid	62.48	62.85
Solyc06g065690.2.1	Tomato	cytosol, plastid	62.48	62.85
VIT_11s0016g04500.t01	Wine grape	cytosol	66.47	62.36
Solyc12g006920.1.1	Tomato	plastid	61.68	61.07
PGSC0003DMT400002753	Potato	plastid	61.28	60.67
KRH03791	Soybean	cytosol	61.08	59.53
KRH56674	Soybean	cytosol	60.48	58.84
Zm00001d037626_P001	Maize	plastid	55.29	57.0
Zm00001d039625_P001	Maize	mitochondrion, plastid	55.49	55.94
Zm00001d043447_P001	Maize	cytosol	18.76	54.65
Zm00001d025714_P001	Maize	mitochondrion	53.29	52.35
Zm00001d003256_P001	Maize	cytosol, mitochondrion	53.09	52.16
Zm00001d049642_P001	Maize	cytosol, plastid	51.9	51.79
Zm00001d035140_P002	Maize	plastid	51.9	51.38
Zm00001d013544_P002	Maize	cytosol, plastid	49.5	47.42
Zm00001d005501_P001	Maize	cytosol	49.3	45.91
Zm00001d034817_P001	Maize	cytosol	54.29	45.79
Zm00001d019363_P001	Maize	cytosol	48.5	45.08
Zm00001d033370_P001	Maize	plastid	49.7	45.03
Zm00001d049469_P001	Maize	mitochondrion	14.77	40.66
Zm00001d006254_P001	Maize	cytosol	33.33	36.07

Protein Annotations

Gene3D:1.25.10.10	EntrezGene:100282594	MapMan:18.4.24.1.2.3	ProteinID:AQK88270.1	ProteinID:AQK88271.1	ProteinID:AQK88272.1
ProteinID:AQK88273.1	ProteinID:AQK88274.1	ProteinID:AQK88275.1	ProteinID:AQK88277.1	ProteinID:AQK88278.1	InterPro:ARM-like
InterPro:ARM-type_fold	EMBL:BT063147	EMBL:BT063339	EMBL:BT064515	UniProt:C0P4C8	GO:GO:0000159
GO:GO:0003674	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0006464
GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0019538
GO:GO:0019888	GO:GO:0030234	GO:GO:0043666	GO:GO:0050790	InterPro:IPR011989	PFAM:PF01603
PIRSF:PIRSF028043	InterPro:PP2A_B56	PANTHER:PTHR10257	PANTHER:PTHR10257:SF13	SUPFAM:SSF48371	UniParc:UPI0001948C59
EnsemblPlantsGene:Zm00001d038944	EnsemblPlants:Zm00001d038944_P003	EnsemblPlants:Zm00001d038944_T003	SEG:seg	:	:

Description

Serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' iota isoform

Coordinates

chr6:+:167398430..167401428

Molecular Weight (calculated)

56399.4 Da

IEP (calculated)

8.065

GRAVY (calculated)

-0.049

Length

501 amino acids

Sequence
(BLAST)

001: MWKQLLSKLP RKSPACGDSG QCSNGTGIQR TSSCGSIPPG RPASAIRRMS SAVFPSSVVA GIEPLVSFKD VPNSEKQNLF VSKLSLCCVV FDFSDPNKSS
101: VEKDIKRQAL LDLIEFVEST NARFSEAAIA ACSRMCAINL FRAFPPSCRS GSSGGGEGDE EEPMFDPAWC HLQLVYELLL KFIGSSSLDA KVGKKHFDHS
201: FIVKLLNLLD SEDPRERDCL KTILHRVYGK FMVHRPFIRK AVSNIFYQFV FETDRHNGIA ELLEVFGSVI SGFALPLKEE HKIFLWRVLI PLHKPKSVGV
301: YLQQLTYCVT QFLEKDPKLA SSVIIGLLRY WPITNCQKEV MFLSEIEEIL ESTSQAEFQK CMVPLFRRIA HCITSSHFQV AERALFVWNN DHIISLIAQN
401: RQVIMPLVIP ALEQNIQNHW NQAVLNLTVN VKKMLSEMDD DLFSSCLAKY KDEEEKRVSL EAKRRLTWEK LESAAAFQPV TGHTAVLVGH RPSANLIATM
501: I

Best Arabidopsis Sequence Match ( AT3G26020.1 )
(BLAST)

001: MWKQILSKLP NKKSSKHEHR GREHGGHSSS SSHTSGASTS KSTDNGAAKS HAKNASPAGK SAASDSGFKD GNLKSSGNNN NNNNNGVFTP YEALPSFKDV
101: PNTEKQNLFI KKLNLCRVVF DFTDPTKNIK EKDIKRQTLL ELVDYVNSPN GKFSEVGIQE VVRMVSANIF RTLNPQPREN KVIDALDLEE EEPSMDLAWP
201: HLQLVYELFL RFVASPETDT KLAKRYIDQS FVLRLLDLFD SEDPRERDCL KTILHRIYGK FMVHRPFIRK SINNIFYRFV FETEKHNGIA EFLEILGSII
301: NGFALPLKDE HKVFLVRVLI PLHKPKCLQM YHQQLSYCIT QFVEKDCKLA DTVIRGLLKY WPVTNSSKEV MFLNELEEVL EATQPPEFQR CMVPLFRQIA
401: RCLNSLHFQV AERALFLWNN NHIENLIMQN RKVILPIIFP ALERNAQKHW NQAVHSLTLN VRKIFHDLDP ELFKECLAKF KEDESKAAET EAKREATWKR
501: LEELGVRKAS

Arabidopsis Description

Protein phosphatase 2A regulatory B subunit family protein [Source:UniProtKB/TrEMBL;Acc:F4JBC4]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.