Factsheet for GSMUA_AchrUn_randomP02030_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 3
cytosol 3
mitochondrion 2
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr2P08330_001	Banana	cytosol, mitochondrion	78.98	77.18
GSMUA_Achr6P34510_001	Banana	cytosol, plastid	63.91	76.59
GSMUA_Achr8P26100_001	Banana	cytosol	75.37	73.96
EES03447	Sorghum	plastid	69.85	65.8
EES18643	Sorghum	plastid	69.64	65.47
TraesCS1D01G390600.1	Wheat	plastid	69.21	65.2
TraesCS1A01G382900.2	Wheat	plastid	68.79	65.06
TraesCS1B01G408600.1	Wheat	plastid	68.79	64.8
Zm00001d038944_P003	Maize	plastid	68.58	64.47
CDX87083	Canola	cytosol	47.13	63.07
VIT_04s0008g04270.t01	Wine grape	mitochondrion	63.06	60.37
KRH52526	Soybean	cytosol	61.57	58.35
KRH05059	Soybean	cytosol, mitochondrion, plastid	60.93	58.33
KRH61853	Soybean	plastid	61.36	58.27
KRH16045	Soybean	cytosol, mitochondrion, plastid	60.51	57.93
Zm00001d009500_P002	Maize	plastid	61.15	57.6
Os05t0555100-01	Rice	plastid	54.78	57.46
VIT_11s0016g04500.t01	Wine grape	cytosol	64.76	57.12
CDY54903	Canola	mitochondrion, plastid	58.81	57.0
CDY05497	Canola	mitochondrion, plastid	58.39	56.7
Solyc06g065690.2.1	Tomato	cytosol, plastid	59.87	56.63
AT5G25510.1	Thale cress	cytosol, mitochondrion, plastid	60.08	56.6
PGSC0003DMT400002753	Potato	plastid	60.72	56.52
PGSC0003DMT400067211	Potato	cytosol, plastid	59.66	56.43
Bra020504.1-P	Field mustard	mitochondrion, plastid	58.17	56.26
Solyc12g006920.1.1	Tomato	plastid	60.08	55.93
CDX80521	Canola	plastid	58.39	55.44
Bra009846.1-P	Field mustard	plastid	58.17	55.35
CDX88186	Canola	cytosol, plastid	57.96	55.15
KRH03791	Soybean	cytosol	59.45	54.47
KRH56674	Soybean	cytosol	58.81	53.79
GSMUA_Achr6P29780_001	Banana	mitochondrion	42.68	53.6
GSMUA_AchrUn_...	Banana	cytosol	29.72	53.03
HORVU1Hr1G084450.3	Barley	plastid	68.79	52.6
GSMUA_Achr7P07360_001	Banana	cytosol	45.65	51.81
GSMUA_Achr8P08980_001	Banana	cytosol, mitochondrion	47.98	51.48
GSMUA_Achr8P32030_001	Banana	cytosol	51.8	50.73
GSMUA_Achr5P25450_001	Banana	cytosol, mitochondrion, nucleus, plastid	52.44	50.61
GSMUA_Achr7P17010_001	Banana	mitochondrion	44.16	50.49
GSMUA_Achr9P19120_001	Banana	mitochondrion, plastid	48.2	48.71
GSMUA_Achr8P01190_001	Banana	cytosol, mitochondrion, nucleus, plastid	18.68	44.67
GSMUA_AchrUn_...	Banana	cytosol	10.62	35.71
GSMUA_Achr3P00600_001	Banana	mitochondrion	29.94	28.31

Protein Annotations

Gene3D:1.25.10.10	MapMan:18.4.24.1.2.3	InterPro:ARM-like	InterPro:ARM-type_fold	GO:GO:0000159	GO:GO:0003674
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0006464	GO:GO:0007154
GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0019538	GO:GO:0019888
GO:GO:0030234	GO:GO:0043666	GO:GO:0050790	EnsemblPlantsGene:GSMUA_AchrUn_randomG02030_001	EnsemblPlants:GSMUA_AchrUn_randomP02030_001	EnsemblPlants:GSMUA_AchrUn_randomT02030_001
InterPro:IPR011989	UniProt:M0U5L5	PFAM:PF01603	PIRSF:PIRSF028043	InterPro:PP2A_B56	PANTHER:PTHR10257
PANTHER:PTHR10257:SF13	SUPFAM:SSF48371	UniParc:UPI0002949949	SEG:seg	:	:

Description

Serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' iota isoform [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG02030_001]

Coordinates

chrchrUn_random:-:9184934..9189724

Molecular Weight (calculated)

53303.8 Da

IEP (calculated)

7.861

GRAVY (calculated)

-0.108

Length

471 amino acids

Sequence
(BLAST)

001: MWKQFLSKLP RKSSKSDASS GSDSHPSNDC TGPLNGNPIQ RTSSGNVVPS RSTTVKRTAS AIFPSSVVTS IEPLLLFKDV PNSQKQNLFI SKLNLCCPMI
101: SACCKMFAVN LFRAFPPNTR SCTGGGENEE EEPIFDPAWC HLQLVYDLLL KFVESSSLDA KIGKKYVDIS FIVRLLDLFD SEDPRERDCL KTILHRIYGK
201: FMVHRPFIRK AVSNIFYRFV FEADRHNGIA ELLEVFGSVI SGFALPLKEE HRLFFQRVLI PLHKPKTLGV YLQQLTYCVT QFIEKEPKMA CSIIKGLVRY
301: WPVTNSQKEV MFLSELEEVL EATDTAELLN CMVPLFQRIG FSINSSHFQV AERALFLLNN DHVISLVSQN RQAIMPLVLP ALERNTRSHW NQAVINLSQN
401: VKNMLSEMDE EIFLACKKEL GEEEEKRRIA EEKRKMIWEH LEGSAALQPV TGNTAVMVMP TVAPPITAAL T

Best Arabidopsis Sequence Match ( AT5G25510.1 )
(BLAST)

001: MFKQFLSKLP RKSSKSDSGE LNRSSSGPVS SPVQRSGTSG GGSGPVRSNS GKRMSSAVFP ASVVAGIEPL VPFKDVPSSE KLNLFVSKVS LCCVTFDFSD
101: PGKNSIEKDV KRQTLLELLD FVASGSVKFT EPAILAMCRM CAVNLFRVFP PNYRSSSGGE NDDDEPMFDP AWPHLQIVYD LLLKFITSPC LDAKVAKKYL
201: DHAFIVRLLD LFDSEDPRER ECLKTILHRV YGKFMVHRPF VRKSMSNIFY RFVFETEKHS GIAELLEIFG SIVSGFALPL KEEHKIFLWR VLIPLHKPKS
301: VGNYFQQLSY CITQFIDKEP KLGSVVIKGL LKFWPITNSQ KEVMFLGEVE EIVEAMSVME FQKIMVPLFL RIACCVTSSH FQVSERALFL WNNDQIVNLI
401: GHNRQAILPI MFTALEKNAQ NHWNQSVLNL TLNVRKMFCE MDEALFMSCH ARFKEDEAKQ CSAAEKRKEV WARLENAASM KPITGKTAVL VTPRATSIAC

Arabidopsis Description

B'KAPPASerine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' kappa isoform [Source:UniProtKB/Swiss-Prot;Acc:Q93YV6]
SUBAcon: [mitochondrion,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.