Factsheet for GSMUA_Achr5P25450_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid, nucleus, cytosol

Predictor Summary:

plastid 4
cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr8P08980_001	Banana	cytosol, mitochondrion	69.47	77.22
GSMUA_Achr8P32030_001	Banana	cytosol	73.77	74.84
GSMUA_AchrUn_...	Banana	cytosol	36.07	66.67
GSMUA_Achr8P01190_001	Banana	cytosol, mitochondrion, nucleus, plastid	26.84	66.5
HORVU5Hr1G120550.1	Barley	nucleus, plastid	69.06	65.95
TraesCS4A01G341600.1	Wheat	plastid	68.85	65.75
EER93109	Sorghum	cytosol, plastid	69.67	65.51
TraesCS5B01G533000.1	Wheat	plastid	68.85	65.5
TraesCS5D01G531300.1	Wheat	plastid	68.85	65.5
Os03t0844500-01	Rice	cytosol	69.26	65.38
GSMUA_AchrUn_...	Banana	cytosol	18.24	63.57
GSMUA_Achr9P19120_001	Banana	mitochondrion, plastid	59.63	62.45
GSMUA_Achr6P29780_001	Banana	mitochondrion	47.54	61.87
Os07t0274800-02	Rice	extracellular, plasma membrane	65.16	61.51
GSMUA_Achr7P17010_001	Banana	mitochondrion	50.2	59.47
OQU88848	Sorghum	cytosol	60.45	58.53
GSMUA_Achr7P07360_001	Banana	cytosol	49.59	58.31
Zm00001d034817_P001	Maize	cytosol	69.06	56.73
GSMUA_Achr6P34510_001	Banana	cytosol, plastid	44.67	55.47
Zm00001d005501_P001	Maize	cytosol	59.84	54.28
Zm00001d019363_P001	Maize	cytosol	59.84	54.17
GSMUA_AchrUn_...	Banana	cytosol	50.61	52.44
GSMUA_Achr2P08330_001	Banana	cytosol, mitochondrion	51.64	52.28
GSMUA_Achr8P26100_001	Banana	cytosol	49.59	50.42
GSMUA_Achr3P00600_001	Banana	mitochondrion	31.35	30.72

Protein Annotations

Gene3D:1.25.10.10	MapMan:18.4.24.1.2.3	InterPro:ARM-like	InterPro:ARM-type_fold	GO:GO:0000159	GO:GO:0003674
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0006464	GO:GO:0007154
GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0019538	GO:GO:0019888
GO:GO:0030234	GO:GO:0043666	GO:GO:0050790	EnsemblPlantsGene:GSMUA_Achr5G25450_001	EnsemblPlants:GSMUA_Achr5P25450_001	EnsemblPlants:GSMUA_Achr5T25450_001
InterPro:IPR011989	UniProt:M0T1M0	PFAM:PF01603	PIRSF:PIRSF028043	InterPro:PP2A_B56	PANTHER:PTHR10257
PANTHER:PTHR10257:SF46	SUPFAM:SSF48371	UniParc:UPI000296DF8D	SEG:seg	:	:

Description

Serine/threonine protein phosphatase 2A 59 kDa regulatory subunit B' gamma isoform [Source:GMGC_GENE;Acc:GSMUA_Achr5G25450_001]

Coordinates

chr5:+:26456729..26462233

Molecular Weight (calculated)

56183.2 Da

IEP (calculated)

8.120

GRAVY (calculated)

-0.235

Length

488 amino acids

Sequence
(BLAST)

001: MIKQILNRLP RKPSKSSDSR DSVGGPTPQS SSSSTSSRNG DLQASRITNL NSQAPPGLSP GLNHQNNFKD VPNSEKQSLF MRKLDLCCNV MQEIAKMVSV
101: NLFRTLTSPP RENMILEKID AEEEEPVMDP AWPHLQIVYE FFLRFVASPE TDAKLAKRYV DHSFVLKLLD LFDSEDPRER EYLKTILHRI YGKFMVHRPF
201: IRKAINNIFY RFIFETEKHN GIAELLEILG SVISGFALPL KEEHKLFLLR ALIPLHKPRC IAMYHQQLSY CITQFIEKDC KLADTVIMGL LKYWPITNSS
301: KEVMFLGELE EVLEATQPAD FQRCMVPLFR QIARCLNSSH FQVAERALFL WNNDHIENLI KQNSKVLLPI IFPALERNTR THWNQAVKSL TLNVCKIFSD
401: HDPDLVAECL KKFEEDEAKN KEIMSKREAT WKRLEEVAAS RAASRESVTV PRVVPFRAAS AAIISLLEDL IKVLNESIFY HVIQLHFC

Best Arabidopsis Sequence Match ( AT4G15415.5 )
(BLAST)

001: MIKQIFGKLP RKPSKSSHND SNPNGEGGVN SYYIPNSGIS SISKPSSKSS ASNSNGANGT VIAPSSTSSN RTNQVNGVYE ALPSFRDVPT SEKPNLFIKK
101: LSMCCVVFDF NDPSKNLREK EIKRQTLLEL VDYIATVSTK LSDAAMQEIA KVAVVNLFRT FPSANHESKI LETLDVDDEE PALEPAWPHL QVVYELLLRF
201: VASPMTDAKL AKRYIDHSFV LKLLDLFDSE DQREREYLKT ILHRIYGKFM VHRPFIRKAI NNIFYRFIFE TEKHNGIAEL LEILGSIING FALPLKEEHK
301: LFLIRALIPL HRPKCASAYH QQLSYCIVQF VEKDFKLADT VIRGLLKYWP VTNSSKEVMF LGELEEVLEA TQAAEFQRCM VPLFRQIARC LNSSHFQVAE
401: RALFLWNNDH IRNLITQNHK VIMPIVFPAM ERNTRGHWNQ AVQSLTLNVR KVMAETDQIL FDECLAKFQE DEANETEVVA KREATWKLLE ELAASKSVSN
501: EAVLVPRFSS SVTLATGKTS GS

Arabidopsis Description

B'GAMMASerine/threonine protein phosphatase 2A 59 kDa regulatory subunit B' gamma isoform [Source:UniProtKB/Swiss-Prot;Acc:Q8RW96]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.