Factsheet for GSMUA_AchrUn_randomP01660_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
mitochondrion 3
cytosol 2
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr8P32030_001	Banana	cytosol	81.06	44.49
GSMUA_Achr8P08980_001	Banana	cytosol, mitochondrion	67.05	40.32
GSMUA_Achr5P25450_001	Banana	cytosol, mitochondrion, nucleus, plastid	66.67	36.07
GSMUA_Achr9P19120_001	Banana	mitochondrion, plastid	62.88	35.62
EER93109	Sorghum	cytosol, plastid	68.94	35.07
TraesCS4A01G341600.1	Wheat	plastid	67.8	35.03
Os03t0844500-01	Rice	cytosol	68.56	35.01
TraesCS5B01G533000.1	Wheat	plastid	67.8	34.89
TraesCS5D01G531300.1	Wheat	plastid	67.8	34.89
HORVU5Hr1G120550.1	Barley	nucleus, plastid	67.42	34.83
GSMUA_Achr6P34510_001	Banana	cytosol, plastid	50.76	34.1
GSMUA_Achr7P17010_001	Banana	mitochondrion	50.76	32.52
Os07t0274800-02	Rice	extracellular, plasma membrane	63.26	32.3
OQU88848	Sorghum	cytosol	60.98	31.94
GSMUA_Achr7P07360_001	Banana	cytosol	50.0	31.81
GSMUA_Achr6P29780_001	Banana	mitochondrion	43.56	30.67
GSMUA_Achr2P08330_001	Banana	cytosol, mitochondrion	55.68	30.5
Zm00001d034817_P001	Maize	cytosol	68.18	30.3
Zm00001d019363_P001	Maize	cytosol	61.74	30.24
Zm00001d005501_P001	Maize	cytosol	61.36	30.11
GSMUA_AchrUn_...	Banana	cytosol	53.03	29.72
GSMUA_Achr8P01190_001	Banana	cytosol, mitochondrion, nucleus, plastid	21.21	28.43
GSMUA_Achr8P26100_001	Banana	cytosol	51.14	28.12
GSMUA_Achr3P00600_001	Banana	mitochondrion	34.47	18.27
GSMUA_AchrUn_...	Banana	cytosol	6.44	12.14

Protein Annotations

Gene3D:1.25.10.10	MapMan:35.1	InterPro:ARM-like	InterPro:ARM-type_fold	GO:GO:0000159	GO:GO:0003674
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0006464	GO:GO:0007154
GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0019538	GO:GO:0019888
GO:GO:0030234	GO:GO:0043666	GO:GO:0050790	EnsemblPlantsGene:GSMUA_AchrUn_randomG01660_001	EnsemblPlants:GSMUA_AchrUn_randomP01660_001	EnsemblPlants:GSMUA_AchrUn_randomT01660_001
InterPro:IPR011989	UniProt:M0U5H8	PFAM:PF01603	InterPro:PP2A_B56	PANTHER:PTHR10257	PANTHER:PTHR10257:SF46
SUPFAM:SSF48371	UniParc:UPI0002948D37	SEG:seg	:	:	:

Description

Putative Serine/threonine protein phosphatase 2A 59 kDa regulatory subunit B' gamma isoform [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG01660_001]

Coordinates

chrchrUn_random:+:6567142..6568496

Molecular Weight (calculated)

29833.3 Da

IEP (calculated)

7.222

GRAVY (calculated)

0.014

Length

264 amino acids

Sequence
(BLAST)

001: MIKQFLSRFP RKQSKSGDKR DSPAGASPPS STSSTSSKIL PAYEALPSFK DVSSSERQIL FIKKLNLCYL ADYVTSANAK FPESDDQPVM DPAWPHLHLL
101: LDLFDSEDKK HNGIAELLEV LGSVINGFAL PLKEEHKLFL VRALIPLHKP KCMGMYHQQL LYCITQFIDK DCKLADIVIR GLLKFWPVTN SSKEVMFLGE
201: LEEVLDATQP AEFQRCMVPL FHQVARCLSS SHFQHIFVSN VFCFTLNACF AGSTVDLLVW FINM

Best Arabidopsis Sequence Match ( AT4G15415.1 )
(BLAST)

001: MIKQIFGKLP RKPSKSSHND SNPNGEGGVN SYYIPNSGIS SISKPSSKSS ASNSNGANGT VIAPSSTSSN RTNQVNGVYE ALPSFRDVPT SEKPNLFIKK
101: LSMCCVVFDF NDPSKNLREK EIKRQTLLEL VDYIATVSTK LSDAAMQEIA KVAVVNLFRT FPSANHESKI LETLDVDDEE PALEPAWPHL QVVYELLLRF
201: VASPMTDAKL AKRYIDHSFV LKLLDLFDSE DQREREYLKT ILHRIYGKFM VHRPFIRKAI NNIFYRFIFE TEKHNGIAEL LEILGSIING FALPLKEEHK
301: LFLIRALIPL HRPKCASAYH QQLSYCIVQF VEKDFKLADT VIRGLLKYWP VTNSSKEVMF LGELEEVLEA TQAAEFQRCM VPLFRQIARC LNSSHFQVAE
401: RALFLWNNDH IRNLITQNHK VIMPIVFPAM ERNTRGHWNQ AVQSLTLNVR KVMAETDQIL FDECLAKFQE DEANETEVVA KREATWKLLE ELAASKSVSN
501: EAVLVPRFSS SVTLATGKTS GS

Arabidopsis Description

B'GAMMASerine/threonine protein phosphatase 2A 59 kDa regulatory subunit B' gamma isoform [Source:UniProtKB/Swiss-Prot;Acc:Q8RW96]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.