Factsheet for GSMUA_Achr2P08330_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

plastid 3
nucleus 1
mitochondrion 4
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_AchrUn_...	Banana	cytosol	77.18	78.98
GSMUA_Achr6P34510_001	Banana	cytosol, plastid	63.28	77.61
GSMUA_Achr8P26100_001	Banana	cytosol	75.73	76.04
EES03447	Sorghum	plastid	75.31	72.6
EES18643	Sorghum	plastid	73.24	70.46
Zm00001d038944_P003	Maize	plastid	72.82	70.06
TraesCS1D01G390600.1	Wheat	plastid	72.61	70.0
TraesCS1A01G382900.2	Wheat	plastid	71.99	69.68
TraesCS1B01G408600.1	Wheat	plastid	71.78	69.2
VIT_04s0008g04270.t01	Wine grape	mitochondrion	67.63	66.26
CDX87083	Canola	cytosol	47.93	65.62
CDY05497	Canola	mitochondrion, plastid	64.73	64.33
CDY54903	Canola	mitochondrion, plastid	64.73	64.2
Bra020504.1-P	Field mustard	mitochondrion, plastid	64.32	63.66
Os05t0555100-01	Rice	plastid	59.13	63.47
KRH05059	Soybean	cytosol, mitochondrion, plastid	64.73	63.41
KRH52526	Soybean	cytosol	65.35	63.38
KRH61853	Soybean	plastid	65.15	63.31
KRH16045	Soybean	cytosol, mitochondrion, plastid	64.52	63.21
VIT_11s0016g04500.t01	Wine grape	cytosol	69.92	63.11
Zm00001d009500_P002	Maize	plastid	64.94	62.6
AT5G25510.1	Thale cress	cytosol, mitochondrion, plastid	64.73	62.4
CDX80521	Canola	plastid	63.69	61.9
Bra009846.1-P	Field mustard	plastid	63.28	61.62
CDX88186	Canola	cytosol, plastid	63.28	61.62
PGSC0003DMT400002753	Potato	plastid	63.49	60.47
KRH03791	Soybean	cytosol	64.32	60.31
Solyc12g006920.1.1	Tomato	plastid	63.28	60.28
Solyc06g065690.2.1	Tomato	cytosol, plastid	62.24	60.24
PGSC0003DMT400067211	Potato	cytosol, plastid	61.83	59.84
KRH56674	Soybean	cytosol	63.9	59.81
GSMUA_Achr8P08980_001	Banana	cytosol, mitochondrion	53.32	58.54
HORVU1Hr1G084450.3	Barley	plastid	71.78	56.17
GSMUA_AchrUn_...	Banana	cytosol	30.5	55.68
GSMUA_Achr6P29780_001	Banana	mitochondrion	42.74	54.93
GSMUA_Achr8P32030_001	Banana	cytosol	53.53	53.64
GSMUA_Achr9P19120_001	Banana	mitochondrion, plastid	50.62	52.36
GSMUA_Achr5P25450_001	Banana	cytosol, mitochondrion, nucleus, plastid	52.28	51.64
GSMUA_Achr7P07360_001	Banana	cytosol	44.4	51.57
GSMUA_Achr7P17010_001	Banana	mitochondrion	43.98	51.46
GSMUA_Achr8P01190_001	Banana	cytosol, mitochondrion, nucleus, plastid	18.26	44.67
GSMUA_AchrUn_...	Banana	cytosol	11.62	40.0
GSMUA_Achr3P00600_001	Banana	mitochondrion	30.29	29.32

Protein Annotations

Gene3D:1.25.10.10	MapMan:18.4.24.1.2.3	InterPro:ARM-like	InterPro:ARM-type_fold	GO:GO:0000159	GO:GO:0003674
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0006464	GO:GO:0007154
GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0019538	GO:GO:0019888
GO:GO:0030234	GO:GO:0043666	GO:GO:0050790	EnsemblPlantsGene:GSMUA_Achr2G08330_001	EnsemblPlants:GSMUA_Achr2P08330_001	EnsemblPlants:GSMUA_Achr2T08330_001
InterPro:IPR011989	UniProt:M0S674	PFAM:PF01603	PIRSF:PIRSF028043	InterPro:PP2A_B56	PANTHER:PTHR10257
PANTHER:PTHR10257:SF13	SUPFAM:SSF48371	UniParc:UPI00029512F0	SEG:seg	:	:

Description

Serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' iota isoform [Source:GMGC_GENE;Acc:GSMUA_Achr2G08330_001]

Coordinates

chr2:-:12349401..12352653

Molecular Weight (calculated)

55377.4 Da

IEP (calculated)

8.860

GRAVY (calculated)

-0.144

Length

482 amino acids

Sequence
(BLAST)

001: MWKQFLSKLP RKSSKSDASS VPSRSTAVKR TASAIFPSSV VTSIEPLLLF KDVPNTEKQN LFISKLNLCC VVFDFSDPNK NSTEKDMKRQ ALLDLIDYVD
101: AGSSRFTEPM ISASCKMFAM NLFRAFPPNN RSSAGGGETE EEEPMFEPAW SHLQLVYDLF LKFIESSSLD AKIGKKYVDH SFIVRLLHLF DSEDPRERDC
201: LKTILHRIYG KFMVHRPFIR KAVSNIFYQF VFETDRHNGI AELLEVFGSV ISGFALPLKE EHKIFLWKAL IPLHKPKTLG VYLQQLTYCV TQFIEKEPKL
301: ASSVIKGLLR YWPVTSSQKE VMFLSELEEV MEATNMVELQ KCMIPLFRRI SFCINSSHFQ VAERALFLWN NDHVLSLVSQ HRQAIMPVVL PALERNTRSH
401: WNQAVLNLTQ NVKKMLSEMD EELFLACKTK FEEEKTRQTI MEEKRRMTWE RLESIAAFRP VTGNTSVLVR PAIAPPVVAA LS

Best Arabidopsis Sequence Match ( AT5G25510.1 )
(BLAST)

001: MFKQFLSKLP RKSSKSDSGE LNRSSSGPVS SPVQRSGTSG GGSGPVRSNS GKRMSSAVFP ASVVAGIEPL VPFKDVPSSE KLNLFVSKVS LCCVTFDFSD
101: PGKNSIEKDV KRQTLLELLD FVASGSVKFT EPAILAMCRM CAVNLFRVFP PNYRSSSGGE NDDDEPMFDP AWPHLQIVYD LLLKFITSPC LDAKVAKKYL
201: DHAFIVRLLD LFDSEDPRER ECLKTILHRV YGKFMVHRPF VRKSMSNIFY RFVFETEKHS GIAELLEIFG SIVSGFALPL KEEHKIFLWR VLIPLHKPKS
301: VGNYFQQLSY CITQFIDKEP KLGSVVIKGL LKFWPITNSQ KEVMFLGEVE EIVEAMSVME FQKIMVPLFL RIACCVTSSH FQVSERALFL WNNDQIVNLI
401: GHNRQAILPI MFTALEKNAQ NHWNQSVLNL TLNVRKMFCE MDEALFMSCH ARFKEDEAKQ CSAAEKRKEV WARLENAASM KPITGKTAVL VTPRATSIAC

Arabidopsis Description

B'KAPPASerine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' kappa isoform [Source:UniProtKB/Swiss-Prot;Acc:Q93YV6]
SUBAcon: [mitochondrion,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.