CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
plastid 4
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH03791	Soybean	cytosol	93.79	93.97
VIT_11s0016g04500.t01	Wine grape	cytosol	73.2	70.6
Solyc12g006920.1.1	Tomato	plastid	64.85	66.01
PGSC0003DMT400002753	Potato	plastid	64.66	65.81
GSMUA_Achr2P08330_001	Banana	cytosol, mitochondrion	59.81	63.9
GSMUA_Achr6P34510_001	Banana	cytosol, plastid	47.77	62.6
KRH16045	Soybean	cytosol, mitochondrion, plastid	58.64	61.38
KRH05059	Soybean	cytosol, mitochondrion, plastid	58.45	61.18
KRH61853	Soybean	plastid	58.84	61.09
KRH52526	Soybean	cytosol	58.84	60.97
HORVU3Hr1G022550.2	Barley	cytosol	45.44	60.62
Zm00001d038944_P003	Maize	plastid	58.84	60.48
EES18643	Sorghum	plastid	58.64	60.28
EES03447	Sorghum	plastid	58.25	60.0
TraesCS1D01G390600.1	Wheat	plastid	58.25	60.0
TraesCS1A01G382900.2	Wheat	plastid	57.67	59.64
TraesCS1B01G408600.1	Wheat	plastid	57.86	59.6
GSMUA_AchrUn_...	Banana	cytosol	53.79	58.81
KRG90768	Soybean	extracellular, mitochondrion	10.68	58.51
GSMUA_Achr8P26100_001	Banana	cytosol	52.82	56.67
Os05t0555100-01	Rice	plastid	48.74	55.9
Zm00001d039625_P001	Maize	mitochondrion, plastid	53.4	55.33
KRG96039	Soybean	cytosol, plastid	49.9	55.03
KRH67758	Soybean	plastid	50.1	54.89
EES00199	Sorghum	cytosol, mitochondrion, plastid	53.59	54.87
Os01t0178400-01	Rice	cytosol	21.55	54.15
TraesCS3B01G140800.1	Wheat	plastid	51.07	54.12
TraesCS3D01G123500.1	Wheat	plastid	50.68	54.04
KRH19952	Soybean	cytosol	50.68	54.04
TraesCS3A01G121400.1	Wheat	plastid	50.68	54.04
EES19134	Sorghum	plastid	50.68	53.93
Zm00001d037626_P001	Maize	plastid	50.87	53.91
TraesCS1D01G119400.1	Wheat	cytosol, mitochondrion	50.68	53.7
TraesCS1A01G118300.2	Wheat	cytosol, mitochondrion	50.49	53.5
KRH32554	Soybean	cytosol	50.49	53.5
TraesCS1B01G138000.1	Wheat	cytosol, mitochondrion	50.29	53.29
HORVU1Hr1G025690.4	Barley	cytosol, mitochondrion	50.29	53.29
Os05t0178400-01	Rice	plasma membrane	50.1	52.55
Zm00001d009500_P002	Maize	plastid	50.87	52.4
KRG94414	Soybean	plastid	52.43	51.63
KRH57624	Soybean	cytosol, mitochondrion	52.23	50.37
KRH35993	Soybean	cytosol	46.6	49.48
KRG94343	Soybean	cytosol, plastid	51.46	49.44
KRH14754	Soybean	cytosol, plastid	51.46	49.44
KRH73387	Soybean	cytosol, plastid	51.07	48.98
KRG97478	Soybean	cytosol, plastid	49.13	48.94
KRH31415	Soybean	cytosol, plastid	49.32	48.75
HORVU1Hr1G084450.3	Barley	plastid	57.86	48.38
KRH36100	Soybean	plastid	32.82	36.98

Protein Annotations

Gene3D:1.25.10.10	EntrezGene:100814349	MapMan:18.4.24.1.2.3	EMBL:ACUP02002795	InterPro:ARM-like	InterPro:ARM-type_fold
EnsemblPlantsGene:GLYMA_05G012200	GO:GO:0000159	GO:GO:0003674	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0006464	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0019538	GO:GO:0019888	GO:GO:0030234	GO:GO:0043666	GO:GO:0050790
UniProt:I1K1B8	InterPro:IPR011989	ProteinID:KRH56672.1	ProteinID:KRH56673.1	EnsemblPlants:KRH56674	ProteinID:KRH56674
ProteinID:KRH56674.1	PFAM:PF01603	PIRSF:PIRSF028043	InterPro:PP2A_B56	PANTHER:PTHR10257	PANTHER:PTHR10257:SF31
SUPFAM:SSF48371	UniParc:UPI0002339C8E	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr5:-:1109904..1113717

Molecular Weight (calculated)

57908.0 Da

IEP (calculated)

8.000

GRAVY (calculated)

-0.068

Length

515 amino acids

Sequence
(BLAST)

001: MIKQILSKLP KKVPKSDSSD SARSDSSNTT TFGNVFQCTN VGSTISSKLN VVKRVSSVVF PASMSAGVEA VDPGLSFKDV SNTQKQSLFI SKLNLCCKLY
101: DMSDPDKNTA EQDLKRQTLL ELVDFVSSGS VKFTEPAIAA LCKMCATNLF RVFPPKFRTS TSGGETEDEE PMFDPAWSHL QVVYDLLLQF INYNSLDVKL
201: AKAHVDHAFV LRLLDLFDSE DPRERDCLKT ILHRIYGKFM VHRPFIRKSV SNIIYRFVFE TERHNGIAEL LEIFGSVISG FALPLKEEHK IFLWRALIPL
301: HKPKSVGIYH QQLTYCVVQF VDKDQRLASS VIKGLLKFWP VTNSQKELMF ISELEEILEM ASMAEFQKIM VPLFRRMACC LNSSHYQVAE RAHLLWNNEH
401: ILNLITQNRQ VILPLVFSAL VHNARSHWNQ AVLNLTQNIR KMLSQMDEEL VVACQRRIEE EDSSASAAAE RRRVTWERIE AAAAAASTSC VQSSSVGGGG
501: DVLVPVKSAT CSVAC

Best Arabidopsis Sequence Match ( AT5G25510.1 )
(BLAST)

001: MFKQFLSKLP RKSSKSDSGE LNRSSSGPVS SPVQRSGTSG GGSGPVRSNS GKRMSSAVFP ASVVAGIEPL VPFKDVPSSE KLNLFVSKVS LCCVTFDFSD
101: PGKNSIEKDV KRQTLLELLD FVASGSVKFT EPAILAMCRM CAVNLFRVFP PNYRSSSGGE NDDDEPMFDP AWPHLQIVYD LLLKFITSPC LDAKVAKKYL
201: DHAFIVRLLD LFDSEDPRER ECLKTILHRV YGKFMVHRPF VRKSMSNIFY RFVFETEKHS GIAELLEIFG SIVSGFALPL KEEHKIFLWR VLIPLHKPKS
301: VGNYFQQLSY CITQFIDKEP KLGSVVIKGL LKFWPITNSQ KEVMFLGEVE EIVEAMSVME FQKIMVPLFL RIACCVTSSH FQVSERALFL WNNDQIVNLI
401: GHNRQAILPI MFTALEKNAQ NHWNQSVLNL TLNVRKMFCE MDEALFMSCH ARFKEDEAKQ CSAAEKRKEV WARLENAASM KPITGKTAVL VTPRATSIAC

Arabidopsis Description

B'KAPPASerine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' kappa isoform [Source:UniProtKB/Swiss-Prot;Acc:Q93YV6]
SUBAcon: [mitochondrion,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.