CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
cytosol 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d038944_P003	Maize	plastid	96.01	96.01
Zm00001d009500_P002	Maize	plastid	85.23	85.4
TraesCS1A01G382900.2	Wheat	plastid	81.84	82.33
TraesCS1D01G390600.1	Wheat	plastid	82.04	82.2
TraesCS1B01G408600.1	Wheat	plastid	81.84	82.0
EES03447	Sorghum	plastid	79.04	79.2
Os05t0555100-01	Rice	plastid	66.27	73.94
GSMUA_Achr2P08330_001	Banana	cytosol, mitochondrion	70.46	73.24
GSMUA_Achr6P34510_001	Banana	cytosol, plastid	55.29	70.48
GSMUA_AchrUn_...	Banana	cytosol	65.47	69.64
AT5G25510.1	Thale cress	cytosol, mitochondrion, plastid	67.27	67.4
VIT_04s0008g04270.t01	Wine grape	mitochondrion	66.07	67.28
HORVU1Hr1G084450.3	Barley	plastid	82.24	66.88
KRH05059	Soybean	cytosol, mitochondrion, plastid	65.47	66.67
KRH16045	Soybean	cytosol, mitochondrion, plastid	65.27	66.46
KRH61853	Soybean	plastid	65.67	66.33
KRH52526	Soybean	cytosol	65.67	66.2
GSMUA_Achr8P26100_001	Banana	cytosol	63.27	66.04
CDX87083	Canola	cytosol	46.31	65.91
CDY05497	Canola	mitochondrion, plastid	63.47	65.57
CDY54903	Canola	mitochondrion, plastid	63.07	65.02
Bra020504.1-P	Field mustard	mitochondrion, plastid	62.87	64.68
CDX80521	Canola	plastid	63.67	64.31
PGSC0003DMT400067211	Potato	cytosol, plastid	63.67	64.06
Solyc06g065690.2.1	Tomato	cytosol, plastid	63.67	64.06
Bra009846.1-P	Field mustard	plastid	63.27	64.04
CDX88186	Canola	cytosol, plastid	63.07	63.84
VIT_11s0016g04500.t01	Wine grape	cytosol	66.47	62.36
Solyc12g006920.1.1	Tomato	plastid	61.28	60.67
PGSC0003DMT400002753	Potato	plastid	60.88	60.28
KRH03791	Soybean	cytosol	61.48	59.92
KRH56674	Soybean	cytosol	60.28	58.64
EES19134	Sorghum	plastid	55.49	57.44
EES00199	Sorghum	cytosol, mitochondrion, plastid	56.49	56.26
EER93109	Sorghum	cytosol, plastid	54.89	52.99
KXG26587	Sorghum	mitochondrion	53.29	52.35
OQU79819	Sorghum	cytosol	52.89	50.09
OQU88848	Sorghum	cytosol	49.3	49.01
KXG37844	Sorghum	plastid	49.9	47.71
EER99281	Sorghum	mitochondrion	34.93	37.16

Protein Annotations

Gene3D:1.25.10.10	MapMan:18.4.24.1.2.3	EntrezGene:8063560	InterPro:ARM-like	InterPro:ARM-type_fold	UniProt:C5YVD2
EnsemblPlants:EES18643	ProteinID:EES18643	ProteinID:EES18643.1	GO:GO:0000159	GO:GO:0003674	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0006464	GO:GO:0007154	GO:GO:0007165
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0019538	GO:GO:0019888	GO:GO:0030234
GO:GO:0043666	GO:GO:0050790	InterPro:IPR011989	PFAM:PF01603	PIRSF:PIRSF028043	InterPro:PP2A_B56
PANTHER:PTHR10257	PANTHER:PTHR10257:SF13	EnsemblPlantsGene:SORBI_3009G225500	SUPFAM:SSF48371	UniParc:UPI0001A88DC1	RefSeq:XP_002440213.1
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr9:+:56733784..56736681

Molecular Weight (calculated)

56462.3 Da

IEP (calculated)

7.968

GRAVY (calculated)

-0.063

Length

501 amino acids

Sequence
(BLAST)

001: MWKQFLSKLP RKSSASGDSG QCSNGTGIQR TSSCSSIPSG RPASAIRRMS SAVFPSSVVA GIEPLVSFKD VPNSEKQNLF VSKLSLCCVV FDFSDPNKSS
101: VEKDIKRQAL LDLIEFVEST NTRFSEAAIA ACSRMCAINL FRAFPPNCRS GSSGGGEGDE DEPMFDPAWC HLQLVYELLL KFIGSSSLDA KIGKKHFDHS
201: FIVKLLNLLD SEDPRERDCL KTILHRVYGK FMVHRPFIRK AVSNIFYQFV FETDRHNGIA ELLEVFGSVI SGFALPLKEE HKIFLWRVLV PLHKPKSVGV
301: YLQQLTYCVT QFIEKDPKLA SSVIIGLLRY WPITNCQKEV MFLSEIEEIL ESTSQAEFQK CMVPLFRRIT HCITSSHFQV AERALFVWNN DHIISLIAQN
401: RQVIMPLVVP ALEQNIQNHW NQAVLNLTVN VKKMFSEMDD DLFSSCLAKY KEEEEKRVSL EAKRKLTWEK LEAAAAFQPV TGHTAVLVGH QPSANMIATL
501: I

Best Arabidopsis Sequence Match ( AT5G25510.1 )
(BLAST)

001: MFKQFLSKLP RKSSKSDSGE LNRSSSGPVS SPVQRSGTSG GGSGPVRSNS GKRMSSAVFP ASVVAGIEPL VPFKDVPSSE KLNLFVSKVS LCCVTFDFSD
101: PGKNSIEKDV KRQTLLELLD FVASGSVKFT EPAILAMCRM CAVNLFRVFP PNYRSSSGGE NDDDEPMFDP AWPHLQIVYD LLLKFITSPC LDAKVAKKYL
201: DHAFIVRLLD LFDSEDPRER ECLKTILHRV YGKFMVHRPF VRKSMSNIFY RFVFETEKHS GIAELLEIFG SIVSGFALPL KEEHKIFLWR VLIPLHKPKS
301: VGNYFQQLSY CITQFIDKEP KLGSVVIKGL LKFWPITNSQ KEVMFLGEVE EIVEAMSVME FQKIMVPLFL RIACCVTSSH FQVSERALFL WNNDQIVNLI
401: GHNRQAILPI MFTALEKNAQ NHWNQSVLNL TLNVRKMFCE MDEALFMSCH ARFKEDEAKQ CSAAEKRKEV WARLENAASM KPITGKTAVL VTPRATSIAC

Arabidopsis Description

B'KAPPASerine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' kappa isoform [Source:UniProtKB/Swiss-Prot;Acc:Q93YV6]
SUBAcon: [mitochondrion,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.