Factsheet for Solyc06g065690.2.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

nucleus 2
plastid 4
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400067211	Potato	cytosol, plastid	98.19	98.19
VIT_04s0008g04270.t01	Wine grape	mitochondrion	71.29	72.15
KRH61853	Soybean	plastid	70.88	71.17
KRH52526	Soybean	cytosol	70.48	70.62
KRH16045	Soybean	cytosol, mitochondrion, plastid	69.48	70.33
KRH05059	Soybean	cytosol, mitochondrion, plastid	69.48	70.33
AT5G25510.1	Thale cress	cytosol, mitochondrion, plastid	69.48	69.2
CDX87083	Canola	cytosol	48.8	69.03
CDY54903	Canola	mitochondrion, plastid	66.47	68.11
CDY05497	Canola	mitochondrion, plastid	65.86	67.63
Bra020504.1-P	Field mustard	mitochondrion, plastid	66.06	67.56
CDX80521	Canola	plastid	66.47	66.73
Bra009846.1-P	Field mustard	plastid	66.06	66.46
CDX88186	Canola	cytosol, plastid	66.06	66.46
EES18643	Sorghum	plastid	64.06	63.67
Zm00001d038944_P003	Maize	plastid	62.85	62.48
EES03447	Sorghum	plastid	62.65	62.4
GSMUA_Achr2P08330_001	Banana	cytosol, mitochondrion	60.24	62.24
TraesCS1A01G382900.2	Wheat	plastid	61.45	61.45
TraesCS1B01G408600.1	Wheat	plastid	61.65	61.4
TraesCS1D01G390600.1	Wheat	plastid	61.65	61.4
GSMUA_AchrUn_...	Banana	cytosol	56.63	59.87
HORVU3Hr1G022550.2	Barley	cytosol	45.98	59.33
GSMUA_Achr6P34510_001	Banana	cytosol, plastid	46.59	59.03
Solyc12g006920.1.1	Tomato	plastid	59.44	58.5
Zm00001d009500_P002	Maize	plastid	57.83	57.6
GSMUA_Achr8P26100_001	Banana	cytosol	54.42	56.46
Os01t0178400-01	Rice	cytosol	22.89	55.61
Os05t0555100-01	Rice	plastid	49.8	55.23
Zm00001d039625_P001	Maize	mitochondrion, plastid	54.82	54.93
TraesCS3A01G121400.1	Wheat	plastid	52.81	54.45
Solyc05g014340.2.1	Tomato	cytosol	54.82	54.38
Zm00001d037626_P001	Maize	plastid	53.01	54.32
EES00199	Sorghum	cytosol, mitochondrion, plastid	54.82	54.27
TraesCS3D01G123500.1	Wheat	plastid	52.61	54.24
EES19134	Sorghum	plastid	52.61	54.13
TraesCS3B01G140800.1	Wheat	plastid	52.81	54.12
TraesCS1D01G119400.1	Wheat	cytosol, mitochondrion	51.81	53.09
Solyc02g067980.2.1	Tomato	nucleus	55.82	53.05
Os05t0178400-01	Rice	plasma membrane	52.21	52.95
TraesCS1A01G118300.2	Wheat	cytosol, mitochondrion	51.61	52.88
HORVU1Hr1G025690.4	Barley	cytosol, mitochondrion	51.41	52.67
TraesCS1B01G138000.1	Wheat	cytosol, mitochondrion	51.0	52.26
Solyc10g083920.1.1	Tomato	nucleus	51.41	52.03
Solyc02g093800.2.1	Tomato	plastid	54.62	52.01
Solyc09g008400.2.1	Tomato	nucleus	50.2	50.71
HORVU1Hr1G084450.3	Barley	plastid	61.45	49.68
Solyc05g055530.2.1	Tomato	cytosol	17.07	39.35
Solyc01g111790.1.1	Tomato	mitochondrion, plastid	33.94	38.24

Protein Annotations

Gene3D:1.25.10.10	MapMan:18.4.24.1.2.3	InterPro:ARM-like	InterPro:ARM-type_fold	GO:GO:0000159	GO:GO:0003674
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006464
GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0019538
GO:GO:0019888	GO:GO:0030234	GO:GO:0043666	GO:GO:0050790	InterPro:IPR011989	UniProt:K4C7J8
PFAM:PF01603	PIRSF:PIRSF028043	InterPro:PP2A_B56	PANTHER:PTHR10257	PANTHER:PTHR10257:SF13	SUPFAM:SSF48371
EnsemblPlantsGene:Solyc06g065690.2	EnsemblPlants:Solyc06g065690.2.1	UniParc:UPI000276598E	SEG:seg	:	:

Description

Serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' iota isoform [Source:Projected from Arabidopsis thaliana (AT5G25510) UniProtKB/Swiss-Prot;Acc:Q93YV6]

Coordinates

chr6:-:41112885..41116104

Molecular Weight (calculated)

56913.7 Da

IEP (calculated)

7.778

GRAVY (calculated)

-0.149

Length

498 amino acids

Sequence
(BLAST)

001: MWKHFLSKLP KKSLKSESVD SGRGNSDSNS PNASSNLGPG RPNSVPRRTS SVVFPASVIA GIEPLISFKD VPSSEKMNLF ISKLSLCCVD FDFRDPTKNV
101: AEKELKRATL FELLDFVSAN PPKFSEPAIL ALCKTCAVNL FRVFPPNYRS NNSHASENDD DEPTFDPAWP HLQIVYDLLL KFVTSSSLEA KVAKKYINHQ
201: FILKLLDLFD SEDPRERDCL KAILHRIYGK FMVHRPYIRK SISNVFYRVV FESEKHNGIA ELLEIFGSVV TGFALPLKEE HKIFLSRTLI PLHKPKSLGI
301: YFQQLSYCIN QFIEKDPKLA STVIRGLLKY WPITSTQKEV MFLSELEEIL EVINMAEFQK VMVPLFWRIG CCINSYHFQV AERALFLWNN DQIVNLIAHN
401: RHVILPIIFP AVESNTQNHW NHAVQNLSLN VRRMFSEMDD VLFLACHSHY KEEQEKIDLE SEKRKEAWEQ LETAASLRPP VAGNIAVLVT PLATSITC

Best Arabidopsis Sequence Match ( AT5G25510.1 )
(BLAST)

001: MFKQFLSKLP RKSSKSDSGE LNRSSSGPVS SPVQRSGTSG GGSGPVRSNS GKRMSSAVFP ASVVAGIEPL VPFKDVPSSE KLNLFVSKVS LCCVTFDFSD
101: PGKNSIEKDV KRQTLLELLD FVASGSVKFT EPAILAMCRM CAVNLFRVFP PNYRSSSGGE NDDDEPMFDP AWPHLQIVYD LLLKFITSPC LDAKVAKKYL
201: DHAFIVRLLD LFDSEDPRER ECLKTILHRV YGKFMVHRPF VRKSMSNIFY RFVFETEKHS GIAELLEIFG SIVSGFALPL KEEHKIFLWR VLIPLHKPKS
301: VGNYFQQLSY CITQFIDKEP KLGSVVIKGL LKFWPITNSQ KEVMFLGEVE EIVEAMSVME FQKIMVPLFL RIACCVTSSH FQVSERALFL WNNDQIVNLI
401: GHNRQAILPI MFTALEKNAQ NHWNQSVLNL TLNVRKMFCE MDEALFMSCH ARFKEDEAKQ CSAAEKRKEV WARLENAASM KPITGKTAVL VTPRATSIAC

Arabidopsis Description

B'KAPPASerine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' kappa isoform [Source:UniProtKB/Swiss-Prot;Acc:Q93YV6]
SUBAcon: [mitochondrion,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.