CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
cytosol 2
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES18643	Sorghum	plastid	79.2	79.04
GSMUA_Achr2P08330_001	Banana	cytosol, mitochondrion	72.6	75.31
GSMUA_Achr6P34510_001	Banana	cytosol, plastid	55.6	70.74
GSMUA_AchrUn_...	Banana	cytosol	65.8	69.85
CDX87083	Canola	cytosol	48.0	68.18
AT5G25510.1	Thale cress	cytosol, mitochondrion, plastid	67.0	67.0
VIT_04s0008g04270.t01	Wine grape	mitochondrion	65.4	66.46
GSMUA_Achr8P26100_001	Banana	cytosol	63.8	66.46
KRH52526	Soybean	cytosol	65.8	66.2
KRH61853	Soybean	plastid	65.6	66.13
KRH05059	Soybean	cytosol, mitochondrion, plastid	64.6	65.65
KRH16045	Soybean	cytosol, mitochondrion, plastid	64.2	65.24
CDY05497	Canola	mitochondrion, plastid	63.2	65.15
CDY54903	Canola	mitochondrion, plastid	63.0	64.81
Bra020504.1-P	Field mustard	mitochondrion, plastid	62.6	64.27
CDX80521	Canola	plastid	63.4	63.91
Bra009846.1-P	Field mustard	plastid	63.2	63.84
CDX88186	Canola	cytosol, plastid	63.2	63.84
PGSC0003DMT400067211	Potato	cytosol, plastid	62.4	62.65
Solyc06g065690.2.1	Tomato	cytosol, plastid	62.4	62.65
VIT_11s0016g04500.t01	Wine grape	cytosol	65.8	61.61
Solyc12g006920.1.1	Tomato	plastid	61.0	60.28
PGSC0003DMT400002753	Potato	plastid	60.6	59.88
KRH56674	Soybean	cytosol	60.0	58.25
EES19134	Sorghum	plastid	56.2	58.06
EES00199	Sorghum	cytosol, mitochondrion, plastid	58.2	57.85
KRH03791	Soybean	cytosol	59.2	57.59
KXG26587	Sorghum	mitochondrion	53.4	52.35
EER93109	Sorghum	cytosol, plastid	53.8	51.83
OQU79819	Sorghum	cytosol	54.2	51.23
OQU88848	Sorghum	cytosol	49.8	49.4
KXG37844	Sorghum	plastid	51.0	48.66
EER99281	Sorghum	mitochondrion	34.6	36.73

Protein Annotations

Gene3D:1.25.10.10	MapMan:18.4.24.1.2.3	EntrezGene:8061878	InterPro:ARM-like	InterPro:ARM-type_fold	UniProt:C5XGS3
EnsemblPlants:EES03447	ProteinID:EES03447	ProteinID:EES03447.1	GO:GO:0000159	GO:GO:0003674	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0006464	GO:GO:0007154	GO:GO:0007165
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0019538	GO:GO:0019888	GO:GO:0030234
GO:GO:0043666	GO:GO:0050790	InterPro:IPR011989	PFAM:PF01603	PIRSF:PIRSF028043	InterPro:PP2A_B56
PANTHER:PTHR10257	PANTHER:PTHR10257:SF13	EnsemblPlantsGene:SORBI_3003G259300	SUPFAM:SSF48371	UniParc:UPI0001A84B1C	RefSeq:XP_002458327.1
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr3:-:59720409..59723966

Molecular Weight (calculated)

56371.1 Da

IEP (calculated)

8.117

GRAVY (calculated)

-0.127

Length

500 amino acids

Sequence
(BLAST)

001: MWKQFLTKLP KKSSASGKGD HGSGSSPGRN ATGNGGTIQR TSSCPSAGPA RPVSSVKRMS SAVFPSSVVA GIEPLVSFKD VPNGEKQNLF VSKVSLCCVV
101: FDFSDPNKNS AEKDFKRQAL VDLMEYVDSA SSRFTETMVA ACCRMFTINL FRVFPPNYRS GSSGGGEGEE EEPMFDPAWP HLHLVYDLLL KFIGSSSLDT
201: KVGKKYFDHT FIVKLLELFD SEDPRERDCL KTILHRIYGK FMVHRPFIRK AVTNIFYHFV FETDRHNGIA ELLEVFGSVI SGFALPLKEE HKIFLWRVLI
301: PLHKPKSVGL YLQQLTYCVT QFVEKEPKLA SSVILGLLRY WPITNSQKEV MFLSEIEEVL EAANTVEFQK CMVPLFRRIA QCINSSHFQV AERALFMWNN
401: DHIISLVAQN RQAIMPIVTP ALEENIQNHW NVSVLNLTTN VKKMLSEMDE ELFSACLAAH KEEEEMRALL KGKRRLAWEL LESAAAFQPV TGNTAVLVNR

Best Arabidopsis Sequence Match ( AT5G25510.1 )
(BLAST)

001: MFKQFLSKLP RKSSKSDSGE LNRSSSGPVS SPVQRSGTSG GGSGPVRSNS GKRMSSAVFP ASVVAGIEPL VPFKDVPSSE KLNLFVSKVS LCCVTFDFSD
101: PGKNSIEKDV KRQTLLELLD FVASGSVKFT EPAILAMCRM CAVNLFRVFP PNYRSSSGGE NDDDEPMFDP AWPHLQIVYD LLLKFITSPC LDAKVAKKYL
201: DHAFIVRLLD LFDSEDPRER ECLKTILHRV YGKFMVHRPF VRKSMSNIFY RFVFETEKHS GIAELLEIFG SIVSGFALPL KEEHKIFLWR VLIPLHKPKS
301: VGNYFQQLSY CITQFIDKEP KLGSVVIKGL LKFWPITNSQ KEVMFLGEVE EIVEAMSVME FQKIMVPLFL RIACCVTSSH FQVSERALFL WNNDQIVNLI
401: GHNRQAILPI MFTALEKNAQ NHWNQSVLNL TLNVRKMFCE MDEALFMSCH ARFKEDEAKQ CSAAEKRKEV WARLENAASM KPITGKTAVL VTPRATSIAC

Arabidopsis Description

B'KAPPASerine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' kappa isoform [Source:UniProtKB/Swiss-Prot;Acc:Q93YV6]
SUBAcon: [mitochondrion,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.