CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid, cytosol

Predictor Summary:

nucleus 1
plastid 4
cytosol 3
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH16045	Soybean	cytosol, mitochondrion, plastid	95.33	95.33
KRH52526	Soybean	cytosol	82.93	82.09
KRH61853	Soybean	plastid	82.72	82.06
VIT_04s0008g04270.t01	Wine grape	mitochondrion	71.95	71.95
AT5G25510.1	Thale cress	cytosol, mitochondrion, plastid	72.15	71.0
CDX87083	Canola	cytosol	50.2	70.17
CDY54903	Canola	mitochondrion, plastid	68.7	69.55
CDY05497	Canola	mitochondrion, plastid	68.5	69.48
Solyc06g065690.2.1	Tomato	cytosol, plastid	70.33	69.48
Bra020504.1-P	Field mustard	mitochondrion, plastid	68.5	69.2
PGSC0003DMT400067211	Potato	cytosol, plastid	69.92	69.08
CDX80521	Canola	plastid	68.7	68.15
CDX88186	Canola	cytosol, plastid	68.29	67.88
Bra009846.1-P	Field mustard	plastid	67.89	67.47
EES18643	Sorghum	plastid	66.67	65.47
TraesCS1D01G390600.1	Wheat	plastid	66.26	65.2
TraesCS1A01G382900.2	Wheat	plastid	65.65	64.86
TraesCS1B01G408600.1	Wheat	plastid	65.85	64.8
GSMUA_Achr2P08330_001	Banana	cytosol, mitochondrion	63.41	64.73
EES03447	Sorghum	plastid	65.65	64.6
Zm00001d038944_P003	Maize	plastid	65.24	64.07
GSMUA_AchrUn_...	Banana	cytosol	58.33	60.93
GSMUA_Achr6P34510_001	Banana	cytosol, plastid	47.76	59.8
HORVU3Hr1G022550.2	Barley	cytosol	46.34	59.07
GSMUA_Achr8P26100_001	Banana	cytosol	57.52	58.96
KRH03791	Soybean	cytosol	61.59	58.95
Os05t0555100-01	Rice	plastid	53.66	58.8
KRH56674	Soybean	cytosol	61.18	58.45
Zm00001d009500_P002	Maize	plastid	58.74	57.8
KRG96039	Soybean	cytosol, plastid	53.66	56.53
KRH67758	Soybean	plastid	53.66	56.17
Os01t0178400-01	Rice	cytosol	23.37	56.1
Zm00001d037626_P001	Maize	plastid	54.88	55.56
EES19134	Sorghum	plastid	54.47	55.37
KRG90768	Soybean	extracellular, mitochondrion	10.57	55.32
Os05t0178400-01	Rice	plasma membrane	54.67	54.79
KRH19952	Soybean	cytosol	53.66	54.66
Zm00001d039625_P001	Maize	mitochondrion, plastid	55.08	54.53
KRH32554	Soybean	cytosol	53.86	54.53
EES00199	Sorghum	cytosol, mitochondrion, plastid	55.08	53.88
TraesCS3D01G123500.1	Wheat	plastid	52.64	53.62
TraesCS3A01G121400.1	Wheat	plastid	52.64	53.62
TraesCS1D01G119400.1	Wheat	cytosol, mitochondrion	52.85	53.5
TraesCS1A01G118300.2	Wheat	cytosol, mitochondrion	52.64	53.29
TraesCS3B01G140800.1	Wheat	plastid	52.64	53.29
HORVU1Hr1G025690.4	Barley	cytosol, mitochondrion	52.44	53.09
TraesCS1B01G138000.1	Wheat	cytosol, mitochondrion	52.24	52.88
HORVU1Hr1G084450.3	Barley	plastid	65.85	52.6
KRG94414	Soybean	plastid	55.69	52.39
KRH31415	Soybean	cytosol, plastid	55.08	52.02
KRG97478	Soybean	cytosol, plastid	54.27	51.64
KRH57624	Soybean	cytosol, mitochondrion	55.89	51.5
KRH14754	Soybean	cytosol, plastid	55.89	51.31
KRH73387	Soybean	cytosol, plastid	55.49	50.84
KRG94343	Soybean	cytosol, plastid	55.08	50.56
KRH35993	Soybean	cytosol	48.98	49.69
KRH36100	Soybean	plastid	34.35	36.98

Protein Annotations

Gene3D:1.25.10.10	EntrezGene:100806230	MapMan:18.4.24.1.2.3	EMBL:ACUP02010663	InterPro:ARM-like	InterPro:ARM-type_fold
EnsemblPlantsGene:GLYMA_17G204800	GO:GO:0000159	GO:GO:0003674	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0006464	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0019538	GO:GO:0019888	GO:GO:0030234	GO:GO:0043666	GO:GO:0050790
UniProt:I1MWM0	InterPro:IPR011989	EnsemblPlants:KRH05059	ProteinID:KRH05059	ProteinID:KRH05059.1	PFAM:PF01603
PIRSF:PIRSF028043	InterPro:PP2A_B56	PANTHER:PTHR10257	PANTHER:PTHR10257:SF13	SUPFAM:SSF48371	UniParc:UPI000233F4FB
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr17:+:33288263..33292033

Molecular Weight (calculated)

56008.2 Da

IEP (calculated)

8.720

GRAVY (calculated)

-0.085

Length

492 amino acids

Sequence
(BLAST)

001: MLKQILSKLP RKSLKPDSDE SPRVDSARSA DSPRAAGRSN KPHGGSSSAA KRASSSAVFP ASMVSGIEPL VPFKDVPNAE KMNLFVSKLS LCCVTFDFTD
101: PSKSSADKDV KRKTLVELVD FVACGTMRFS EPAILAICRM CAINLFRVFP PNYRASGGGE NDDDEPLFDP AWPHLQLVYE LLLKFISSSC IDAKVAKKYI
201: DHSFIARLLE LFDSEDPRER DCLKTILHRI YGKFMVHRPY IRKSINNIFY RFVFETDKPN GIGELLEIFG SVITGFALPL KEEHKIFLWR VLVPLHKPKS
301: IGAYFQQLSY CVMQFIEKEP KLASIVIRGL LKYWPATNSQ KEVMFLGELE EILEVINMVE FQRIMVPLFR RIGCCINSLH FQVAERALFL WNNDHIVNLI
401: AHNRQVILPI IFSALDRNVQ SHWNPAVVNL TNNIRKMFLE MDEKFFISCH NHFKEEEAIL ISTGEKRKEA WKQLEHAASL RPVTGNTAVL VS

Best Arabidopsis Sequence Match ( AT5G25510.1 )
(BLAST)

001: MFKQFLSKLP RKSSKSDSGE LNRSSSGPVS SPVQRSGTSG GGSGPVRSNS GKRMSSAVFP ASVVAGIEPL VPFKDVPSSE KLNLFVSKVS LCCVTFDFSD
101: PGKNSIEKDV KRQTLLELLD FVASGSVKFT EPAILAMCRM CAVNLFRVFP PNYRSSSGGE NDDDEPMFDP AWPHLQIVYD LLLKFITSPC LDAKVAKKYL
201: DHAFIVRLLD LFDSEDPRER ECLKTILHRV YGKFMVHRPF VRKSMSNIFY RFVFETEKHS GIAELLEIFG SIVSGFALPL KEEHKIFLWR VLIPLHKPKS
301: VGNYFQQLSY CITQFIDKEP KLGSVVIKGL LKFWPITNSQ KEVMFLGEVE EIVEAMSVME FQKIMVPLFL RIACCVTSSH FQVSERALFL WNNDQIVNLI
401: GHNRQAILPI MFTALEKNAQ NHWNQSVLNL TLNVRKMFCE MDEALFMSCH ARFKEDEAKQ CSAAEKRKEV WARLENAASM KPITGKTAVL VTPRATSIAC

Arabidopsis Description

B'KAPPASerine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' kappa isoform [Source:UniProtKB/Swiss-Prot;Acc:Q93YV6]
SUBAcon: [mitochondrion,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.