Factsheet for Bra020504.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid

Predictor Summary:

plastid 5
cytosol 2
nucleus 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY05497	Canola	mitochondrion, plastid	97.74	98.14
AT5G25510.1	Thale cress	cytosol, mitochondrion, plastid	85.22	83.0
Bra009846.1-P	Field mustard	plastid	82.96	81.62
KRH52526	Soybean	cytosol	71.05	69.62
KRH61853	Soybean	plastid	70.84	69.56
KRH16045	Soybean	cytosol, mitochondrion, plastid	69.61	68.9
KRH05059	Soybean	cytosol, mitochondrion, plastid	69.2	68.5
VIT_04s0008g04270.t01	Wine grape	mitochondrion	68.99	68.29
Solyc06g065690.2.1	Tomato	cytosol, plastid	67.56	66.06
PGSC0003DMT400067211	Potato	cytosol, plastid	67.35	65.86
TraesCS1A01G382900.2	Wheat	plastid	66.32	64.86
TraesCS1D01G390600.1	Wheat	plastid	66.53	64.8
TraesCS1B01G408600.1	Wheat	plastid	66.32	64.6
GSMUA_Achr2P08330_001	Banana	cytosol, mitochondrion	63.66	64.32
EES18643	Sorghum	plastid	64.68	62.87
EES03447	Sorghum	plastid	64.27	62.6
Zm00001d038944_P003	Maize	plastid	64.07	62.28
HORVU3Hr1G022550.2	Barley	cytosol	46.2	58.29
GSMUA_AchrUn_...	Banana	cytosol	56.26	58.17
GSMUA_Achr6P34510_001	Banana	cytosol, plastid	46.41	57.51
Zm00001d009500_P002	Maize	plastid	58.11	56.6
Os05t0555100-01	Rice	plastid	51.75	56.12
GSMUA_Achr8P26100_001	Banana	cytosol	55.24	56.04
Bra039553.1-P	Field mustard	plastid	55.85	55.06
Os01t0178400-01	Rice	cytosol	23.0	54.63
Bra012790.1-P	Field mustard	mitochondrion, plastid	54.83	54.6
EES19134	Sorghum	plastid	54.0	54.34
Zm00001d037626_P001	Maize	plastid	54.0	54.12
TraesCS1A01G118300.2	Wheat	cytosol, mitochondrion	53.8	53.91
TraesCS1D01G119400.1	Wheat	cytosol, mitochondrion	53.59	53.7
HORVU1Hr1G025690.4	Barley	cytosol, mitochondrion	53.39	53.5
Bra031294.1-P	Field mustard	cytosol, plastid	55.85	53.44
TraesCS3A01G121400.1	Wheat	plastid	52.98	53.42
TraesCS1B01G138000.1	Wheat	cytosol, mitochondrion	53.18	53.29
TraesCS3D01G123500.1	Wheat	plastid	52.77	53.21
TraesCS3B01G140800.1	Wheat	plastid	52.77	52.88
Bra025178.1-P	Field mustard	cytosol, plastid	54.21	52.8
Zm00001d039625_P001	Maize	mitochondrion, plastid	53.8	52.72
Bra019720.1-P	Field mustard	plastid	53.18	52.54
HORVU1Hr1G084450.3	Barley	plastid	66.32	52.44
Os05t0178400-01	Rice	plasma membrane	52.77	52.34
EES00199	Sorghum	cytosol, mitochondrion, plastid	53.8	52.09
Bra029801.1-P	Field mustard	cytosol, plastid	51.54	51.65
Bra001296.1-P	Field mustard	cytosol, plastid	51.75	51.53
Bra025179.1-P	Field mustard	cytosol	49.49	50.84
Bra036351.1-P	Field mustard	cytosol	49.28	50.0
Bra036352.1-P	Field mustard	cytosol, plastid	54.21	49.91
Bra028832.1-P	Field mustard	cytosol, plastid	48.05	48.55
Bra003201.1-P	Field mustard	golgi	36.96	47.24
Bra007117.1-P	Field mustard	cytosol, plastid	46.82	46.34
Bra031075.1-P	Field mustard	mitochondrion	26.49	40.82
Bra017338.1-P	Field mustard	cytosol	24.64	39.09

Protein Annotations

Gene3D:1.25.10.10	MapMan:18.4.24.1.2.3	InterPro:ARM-like	InterPro:ARM-type_fold	EnsemblPlantsGene:Bra020504	EnsemblPlants:Bra020504.1
EnsemblPlants:Bra020504.1-P	GO:GO:0000159	GO:GO:0003674	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0006464	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0019538	GO:GO:0019888	GO:GO:0030234	GO:GO:0043666	GO:GO:0050790
InterPro:IPR011989	UniProt:M4DVG0	PFAM:PF01603	PIRSF:PIRSF028043	InterPro:PP2A_B56	PANTHER:PTHR10257
PANTHER:PTHR10257:SF13	SUPFAM:SSF48371	UniParc:UPI0002546E7E	SEG:seg	:	:

Description

AT5G25510 (E=2e-223) | serine/threonine protein phosphatase 2A (PP2A) regulatory subunit B', putative

Coordinates

chrA02:+:24921310..24923303

Molecular Weight (calculated)

55102.2 Da

IEP (calculated)

8.296

GRAVY (calculated)

-0.007

Length

487 amino acids

Sequence
(BLAST)

001: MAMFKQFLSK LPRKSSSKPD STSDPSGSSV VRSNSVKRMS SAVFPSSVVA GIEPLVPFKD VPTSEKLNLF VSKLSLCCVT FDFSDQTKNS LEKDVKRQTL
101: LELLDFVSSS SSVRFTEPAI LAMCKMSAVN LFRVFPPSYR ERNDSDDNDP TFEPAWPHLQ IVYDLLLKFI TSPCLDAKLA KKYLDHGFIL RLLELFDSED
201: PRERECLKTI LHRVYGKFMV HRPFIRKAMS NIFSSFVFEA EKRGGGGGIA ELLEIFGSIV SGFALPLKEE HKIFLWRVLI PLHKAKSVGG YFHQLSYCVT
301: QFIDKEPKLG SVVIKGLLKF WPVTNSQKEV MFLGEVEEIV EVMSLVEFQK VMVPLFLRIA ACVNSCHFQV SERALFLWNN DQIVNLIAQN RQAILPIMFA
401: ALAKNAESHW NQSVLNLTLN VRKMFCEMDE ALFMSCHTRF QEDEAEQCSA EEKRKETWAR LEKAASMKPV TGKTAVLVTP LATSIAC

Best Arabidopsis Sequence Match ( AT5G25510.1 )
(BLAST)

001: MFKQFLSKLP RKSSKSDSGE LNRSSSGPVS SPVQRSGTSG GGSGPVRSNS GKRMSSAVFP ASVVAGIEPL VPFKDVPSSE KLNLFVSKVS LCCVTFDFSD
101: PGKNSIEKDV KRQTLLELLD FVASGSVKFT EPAILAMCRM CAVNLFRVFP PNYRSSSGGE NDDDEPMFDP AWPHLQIVYD LLLKFITSPC LDAKVAKKYL
201: DHAFIVRLLD LFDSEDPRER ECLKTILHRV YGKFMVHRPF VRKSMSNIFY RFVFETEKHS GIAELLEIFG SIVSGFALPL KEEHKIFLWR VLIPLHKPKS
301: VGNYFQQLSY CITQFIDKEP KLGSVVIKGL LKFWPITNSQ KEVMFLGEVE EIVEAMSVME FQKIMVPLFL RIACCVTSSH FQVSERALFL WNNDQIVNLI
401: GHNRQAILPI MFTALEKNAQ NHWNQSVLNL TLNVRKMFCE MDEALFMSCH ARFKEDEAKQ CSAAEKRKEV WARLENAASM KPITGKTAVL VTPRATSIAC

Arabidopsis Description

B'KAPPASerine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' kappa isoform [Source:UniProtKB/Swiss-Prot;Acc:Q93YV6]
SUBAcon: [mitochondrion,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.