Factsheet for Bra025178.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

nucleus 2
plastid 2
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY13605	Canola	cytosol, plastid	93.2	91.55
Bra036352.1-P	Field mustard	cytosol, plastid	92.8	87.71
AT3G26020.4	Thale cress	cytosol, plastid	87.4	82.61
Bra019720.1-P	Field mustard	plastid	80.0	81.14
Solyc05g014340.2.1	Tomato	cytosol	72.2	71.91
PGSC0003DMT400045008	Potato	cytosol, plastid	71.6	71.31
KRG97478	Soybean	cytosol, plastid	73.0	70.6
KRH31415	Soybean	cytosol, plastid	73.4	70.44
VIT_01s0010g02350.t01	Wine grape	cytosol, mitochondrion, plastid	72.0	69.9
HORVU2Hr1G083850.1	Barley	cytosol	68.8	68.8
Os04t0485100-01	Rice	plasma membrane	69.6	68.37
KXG26587	Sorghum	mitochondrion	69.2	67.84
TraesCS2B01G362000.2	Wheat	cytosol, mitochondrion	68.2	67.79
TraesCS2A01G320700.2	Wheat	mitochondrion	68.2	67.79
TraesCS2D01G341400.3	Wheat	mitochondrion	68.2	67.79
EER93109	Sorghum	cytosol, plastid	69.8	67.24
Os08t0122000-01	Rice	plasma membrane	68.8	66.67
HORVU7Hr1G074840.1	Barley	mitochondrion, plastid	68.8	66.54
TraesCS7B01G214300.2	Wheat	nucleus	68.8	66.54
Os03t0844500-01	Rice	cytosol	68.6	66.34
TraesCS7D01G310200.1	Wheat	cytosol, plastid	68.6	66.34
TraesCS7A01G313600.1	Wheat	nucleus	68.2	65.96
Zm00001d043447_P001	Maize	cytosol	22.6	65.7
HORVU5Hr1G120550.1	Barley	nucleus, plastid	67.0	65.56
TraesCS4A01G341600.1	Wheat	plastid	66.8	65.36
TraesCS5D01G531300.1	Wheat	plastid	67.0	65.3
TraesCS5B01G533000.1	Wheat	plastid	66.8	65.11
Bra039553.1-P	Field mustard	plastid	63.8	64.57
OQU79819	Sorghum	cytosol	68.0	64.27
Bra012790.1-P	Field mustard	mitochondrion, plastid	62.4	63.8
Bra031294.1-P	Field mustard	cytosol, plastid	64.6	63.46
Bra025179.1-P	Field mustard	cytosol	59.6	62.87
Os07t0274800-02	Rice	extracellular, plasma membrane	64.6	62.48
Bra036351.1-P	Field mustard	cytosol	59.6	62.08
HORVU0Hr1G004960.2	Barley	cytosol	61.0	61.37
Bra001296.1-P	Field mustard	cytosol, plastid	59.6	60.94
OQU88848	Sorghum	cytosol	61.4	60.91
Bra029801.1-P	Field mustard	cytosol, plastid	59.2	60.91
Bra028832.1-P	Field mustard	cytosol, plastid	55.2	57.26
Bra003201.1-P	Field mustard	golgi	41.6	54.59
Bra020504.1-P	Field mustard	mitochondrion, plastid	52.8	54.21
Bra009846.1-P	Field mustard	plastid	53.2	53.74
Bra007117.1-P	Field mustard	cytosol, plastid	51.6	52.44
GSMUA_Achr8P01190_001	Banana	cytosol, mitochondrion, nucleus, plastid	20.0	50.76
Bra031075.1-P	Field mustard	mitochondrion	28.2	44.62
Bra017338.1-P	Field mustard	cytosol	27.2	44.3

Protein Annotations

Gene3D:1.25.10.10	MapMan:18.4.24.1.2.3	InterPro:ARM-like	InterPro:ARM-type_fold	EnsemblPlantsGene:Bra025178	EnsemblPlants:Bra025178.1
EnsemblPlants:Bra025178.1-P	GO:GO:0000159	GO:GO:0003674	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0006464	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0019538	GO:GO:0019888	GO:GO:0030234	GO:GO:0043666	GO:GO:0050790
InterPro:IPR011989	UniProt:M4E8S2	PFAM:PF01603	PIRSF:PIRSF028043	InterPro:PP2A_B56	PANTHER:PTHR10257
PANTHER:PTHR10257:SF46	SUPFAM:SSF48371	UniParc:UPI000253F70F	SEG:seg	:	:

Description

AT3G26020 (E=4e-243) | serine/threonine protein phosphatase 2A (PP2A) regulatory subunit B', putative

Coordinates

chrA06:-:22923750..22925768

Molecular Weight (calculated)

57861.6 Da

IEP (calculated)

9.269

GRAVY (calculated)

-0.487

Length

500 amino acids

Sequence
(BLAST)

001: MWKQILSKLP KKSSKNDHHH HHRGREHGAG HSSSSSHAST SKSSDNGHGK SANSHTKNAP SGGRSAGNTN TNNNGGVFIP YEALPSFKDV PNTEKQNLFI
101: KKLNLCRVVF DFTDPTKNIK EKDIKRQTLL ELVDYVNSAN GKFSEVSIQE VVRMVSANIF RTLNPQPREN KVIDALDLEE EEPSMDLAWP HLQLVYELFL
201: RFVASPDTDT KLAKRYVDQS FVLRLLDLFD SEDPRERDCL KTILHRIYGK FMVHRPFIRK SINNIFYRFV FETEKHNGIA EFLEILGSII NGFALPLKDE
301: HKVFLVRVLI PLHKPKCLQM YHQQLSYCIT QFVEKDCKLA DTVIRGLLKY WPVTNSSKEV MFLNELEEVL EATQPPEFQR CMVPLFRQIA RCLNSLHFQV
401: AERALFLWNN NHIENLIMQS RKVILPIIFP ALERNAQKHW NQAVHSLTLN VRKIFSDLDP ELFKECLAKF KEDESKEGET KAKREATWRR LEEVGMRKAS

Best Arabidopsis Sequence Match ( AT3G26020.6 )
(BLAST)

001: MWKQILSKLP NKKSSKHEHR GREHGGHSSS SSHTSGASTS KSTDNGAAKS HAKNASPAGK SAASDSGFKD GNLKSSGNNN NNNNNGVFTP YEALPSFKDV
101: PNTEKQNLFI KKLNLCRVVF DFTDPTKNIK EKDIKRQTLL ELVDYVNSPN GKFSEVGIQE VVRMVSANIF RTLNPQPREN KVIDALDLEE EEPSMDLAWP
201: HLQLVYELFL RFVASPETDT KLAKRYIDQS FVLRLLDLFD SEDPRERDCL KTILHRIYGK FMVHRPFIRK SINNIFYRFV FETEKHNGIA EFLEILGSII
301: NGFALPLKDE HKVFLVRVLI PLHKPKCLQM YHQQLSYCIT QFVEKDCKLA DTVIRGLLKY WPVTNSSKEV MFLNELEEVL EATQPPEFQR CMVPLFRQIA
401: RCLNSLHFQV AERALFLWNN NHIENLIMQN RKVILPIIFP ALERNAQKHW NQAVHSLTLN VRKIFHDLDP ELFKECLAKF KEDESKAAET EAKREATWKR
501: LEELGVRKAS

Arabidopsis Description

Protein phosphatase 2A regulatory B subunit family protein [Source:UniProtKB/TrEMBL;Acc:F4JBC4]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.