Factsheet for Os04t0485100-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
cytosol 4
mitochondrion 3

Predictors

GFP

MS/MS

Papers

plasma membrane: 27800704

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG26587	Sorghum	mitochondrion	92.73	92.55
Zm00001d003256_P001	Maize	cytosol, mitochondrion	91.55	91.37
TraesCS2D01G341400.3	Wheat	mitochondrion	89.0	90.06
TraesCS2B01G362000.2	Wheat	cytosol, mitochondrion	89.0	90.06
TraesCS2A01G320700.2	Wheat	mitochondrion	89.0	90.06
HORVU2Hr1G083850.1	Barley	cytosol	88.41	90.0
Zm00001d025714_P001	Maize	mitochondrion	89.78	89.61
HORVU0Hr1G004960.2	Barley	cytosol	72.69	74.45
VIT_14s0171g00530.t01	Wine grape	cytosol, plastid	59.14	74.14
Solyc02g067980.2.1	Tomato	nucleus	74.07	71.95
CDX98102	Canola	cytosol, plastid	64.64	71.06
Solyc02g093800.2.1	Tomato	plastid	72.69	70.75
PGSC0003DMT400017950	Potato	plastid	72.5	70.42
PGSC0003DMT400052115	Potato	plastid	71.91	70.38
VIT_01s0010g02350.t01	Wine grape	cytosol, mitochondrion, plastid	70.73	69.9
Os03t0844500-01	Rice	cytosol	70.92	69.83
Bra025178.1-P	Field mustard	cytosol, plastid	68.37	69.6
Solyc05g014340.2.1	Tomato	cytosol	68.37	69.32
PGSC0003DMT400045008	Potato	cytosol, plastid	67.98	68.92
Os08t0122000-01	Rice	plasma membrane	69.74	68.8
AT1G13460.2	Thale cress	cytosol, plastid	66.4	68.7
KRG94414	Soybean	plastid	69.55	67.69
KRH57624	Soybean	cytosol, mitochondrion	70.53	67.23
CDX83578	Canola	cytosol	63.46	67.01
CDY30030	Canola	plastid	65.03	66.73
KRG97478	Soybean	cytosol, plastid	67.58	66.54
Bra019720.1-P	Field mustard	plastid	64.44	66.53
KRG94343	Soybean	cytosol, plastid	69.74	66.23
Bra036352.1-P	Field mustard	cytosol, plastid	68.76	66.16
KRH31415	Soybean	cytosol, plastid	67.58	66.03
Os07t0274800-02	Rice	extracellular, plasma membrane	65.03	64.02
VIT_14s0219g00010.t01	Wine grape	cytosol	16.11	63.57
CDY13605	Canola	cytosol, plastid	63.46	63.46
AT3G26020.4	Thale cress	cytosol, plastid	63.85	61.44
PGSC0003DMT400034814	Potato	cytosol	24.75	59.72
Os01t0178400-01	Rice	cytosol	21.81	54.15
Os03t0681800-00	Rice	plasma membrane	55.99	53.27
Os05t0178400-01	Rice	plasma membrane	49.12	50.92
Os05t0555100-01	Rice	plastid	44.4	50.33
CDY50168	Canola	cytosol	15.32	48.45
Os09t0542700-00	Rice	cytosol	31.43	33.2

Protein Annotations

Gene3D:1.25.10.10	MapMan:18.4.24.1.2.3	EntrezGene:4336207	EMBL:AK103052	InterPro:ARM-like	InterPro:ARM-type_fold
ProteinID:BAF15044.1	ProteinID:BAS89782.1	ProteinID:CAD41393.2	ProteinID:CAE03154.2	ProteinID:EAZ31144.1	GO:GO:0000159
GO:GO:0003674	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0006464
GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0019538
GO:GO:0019888	GO:GO:0030234	GO:GO:0043666	InterPro:IPR011989	EnsemblPlantsGene:Os04g0485100	EnsemblPlants:Os04t0485100-01
PFAM:PF01603	PIRSF:PIRSF028043	InterPro:PP2A_B56	PANTHER:PTHR10257	PANTHER:PTHR10257:SF46	UniProt:Q7FAG9
SUPFAM:SSF48371	UniParc:UPI00001B0F7B	RefSeq:XP_015636613.1	:	:	:

Description

PROTEIN PHOSPHATASE 2A REGULATORY SUBUNIT B' etaSimilar to Protein phosphatase 2A B' regulatory subunit. (Os04t0485100-01);Similar to Protein phosphatase 2A B' regulatory subunit. (Os04t0485100-02)

Coordinates

chr4:-:24243991..24247747

Molecular Weight (calculated)

58138.7 Da

IEP (calculated)

7.813

GRAVY (calculated)

-0.404

Length

509 amino acids

Sequence
(BLAST)

001: MIKQILGRLP RKPGKAGDSR DAAGPNGNEP SNSYSVARSV EQGNKRSGNG DYVVPAGLTP NPMMNGTVVY HSNEPLPAFK DVPASEKQNL FVKKVNLCCA
101: VYDFADPTKN LKEKETKRQT LMELVDYVTS ANGKFSEVVM SEITKMVSIN LFRSSSPTPR ENKAIEGVDL EEEEPLMDPA WSHLQIVYEV FLRFVASQET
201: DAKLAKRYID HSFILRLLDL FDSEDPRERD YLKTILHRIY GKFMVHRPFI RKAINNIFYR FIFETEKHNG VAELLEILGS IINGFALPLK EEHKLFLVRA
301: LIPLHKPKCV SMYHQQLSYC ITQFVEKDCK LADTVIRGLL KYWPVTNSSK EVMFLGELEE VLEATQPAEF QRCMVPLFRQ IACSMNSSHF QVAERALFLW
401: NNDHIENLIK QNYKVILPII FPALERNARG HWNQAVRSLT LNVRKIFSDH DSAFFGECTQ KFNDDELKQE ESNSKREALW KRLEEAAVPR SDNNNPVGTP
501: NGKFSQAAG

Best Arabidopsis Sequence Match ( AT4G15415.5 )
(BLAST)

001: MIKQIFGKLP RKPSKSSHND SNPNGEGGVN SYYIPNSGIS SISKPSSKSS ASNSNGANGT VIAPSSTSSN RTNQVNGVYE ALPSFRDVPT SEKPNLFIKK
101: LSMCCVVFDF NDPSKNLREK EIKRQTLLEL VDYIATVSTK LSDAAMQEIA KVAVVNLFRT FPSANHESKI LETLDVDDEE PALEPAWPHL QVVYELLLRF
201: VASPMTDAKL AKRYIDHSFV LKLLDLFDSE DQREREYLKT ILHRIYGKFM VHRPFIRKAI NNIFYRFIFE TEKHNGIAEL LEILGSIING FALPLKEEHK
301: LFLIRALIPL HRPKCASAYH QQLSYCIVQF VEKDFKLADT VIRGLLKYWP VTNSSKEVMF LGELEEVLEA TQAAEFQRCM VPLFRQIARC LNSSHFQVAE
401: RALFLWNNDH IRNLITQNHK VIMPIVFPAM ERNTRGHWNQ AVQSLTLNVR KVMAETDQIL FDECLAKFQE DEANETEVVA KREATWKLLE ELAASKSVSN
501: EAVLVPRFSS SVTLATGKTS GS

Arabidopsis Description

B'GAMMASerine/threonine protein phosphatase 2A 59 kDa regulatory subunit B' gamma isoform [Source:UniProtKB/Swiss-Prot;Acc:Q8RW96]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.