Factsheet for PGSC0003DMT400034814

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
plastid 2
cytosol 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
EpiLoc:	nucleus
iPSORT:	plastid
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	plastid
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr8P01190_001	Banana	cytosol, mitochondrion, nucleus, plastid	39.34	42.13
Zm00001d043447_P001	Maize	cytosol	24.64	30.23
CDY50168	Canola	cytosol	22.75	29.81
PGSC0003DMT400017950	Potato	plastid	64.45	25.95
PGSC0003DMT400052115	Potato	plastid	63.51	25.77
PGSC0003DMT400045008	Potato	cytosol, plastid	60.66	25.5
Os03t0844500-01	Rice	cytosol	60.66	24.76
Os04t0485100-01	Rice	plasma membrane	59.72	24.75
KXG26587	Sorghum	mitochondrion	58.77	24.31
TraesCS2D01G341400.3	Wheat	mitochondrion	57.82	24.25
TraesCS2B01G362000.2	Wheat	cytosol, mitochondrion	57.82	24.25
TraesCS2A01G320700.2	Wheat	mitochondrion	57.82	24.25
HORVU2Hr1G083850.1	Barley	cytosol	57.35	24.2
TraesCS4A01G341600.1	Wheat	plastid	58.29	24.07
EER93109	Sorghum	cytosol, plastid	58.77	23.89
HORVU7Hr1G074840.1	Barley	mitochondrion, plastid	58.29	23.79
TraesCS5D01G531300.1	Wheat	plastid	57.82	23.78
HORVU5Hr1G120550.1	Barley	nucleus, plastid	57.35	23.68
OQU79819	Sorghum	cytosol	59.24	23.63
TraesCS7D01G310200.1	Wheat	cytosol, plastid	57.82	23.6
TraesCS7B01G214300.2	Wheat	nucleus	57.82	23.6
TraesCS5B01G533000.1	Wheat	plastid	57.35	23.59
TraesCS7A01G313600.1	Wheat	nucleus	57.35	23.4
Os08t0122000-01	Rice	plasma membrane	56.87	23.26
Os07t0274800-02	Rice	extracellular, plasma membrane	56.4	23.02
PGSC0003DMT400072691	Potato	cytosol, mitochondrion	50.24	21.54
PGSC0003DMT400001856	Potato	cytosol, mitochondrion, plastid	54.5	21.1
OQU88848	Sorghum	cytosol	50.24	21.03
PGSC0003DMT400060086	Potato	cytosol, plastid	45.97	20.42
PGSC0003DMT400067211	Potato	cytosol, plastid	46.92	19.88
HORVU0Hr1G004960.2	Barley	cytosol	46.45	19.72
PGSC0003DMT400002753	Potato	plastid	41.23	17.19
PGSC0003DMT400008785	Potato	cytosol	27.49	14.25

Protein Annotations

Gene3D:1.25.10.10	MapMan:35.1	InterPro:ARM-like	InterPro:ARM-type_fold	GO:GO:0000159	GO:GO:0003674
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0006464	GO:GO:0007154
GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0019538	GO:GO:0019888
GO:GO:0030234	GO:GO:0043666	GO:GO:0050790	InterPro:IPR011989	UniProt:M1B1B4	PFAM:PF01603
EnsemblPlantsGene:PGSC0003DMG400013380	PGSC:PGSC0003DMG400013380	EnsemblPlants:PGSC0003DMT400034814	InterPro:PP2A_B56	PANTHER:PTHR10257	PANTHER:PTHR10257:SF46
SUPFAM:SSF48371	UniParc:UPI000294ED49	:	:	:	:

Description

Protein phosphatase 2a, regulatory subunit [Source:PGSC_GENE;Acc:PGSC0003DMG400013380]

Coordinates

chr3:+:244420..246638

Molecular Weight (calculated)

24183.4 Da

IEP (calculated)

6.880

GRAVY (calculated)

-0.125

Length

211 amino acids

Sequence
(BLAST)

001: MSLSGVTSSL ATGLNNGDGL PMAVNTKVNG TVAPYEALPS FRDVQYSDKQ NLFIKKLKLC CVLFDFTDPT KGLMEKDVKR QTLVELVDYV TSADGKFTEP
101: VVQEIVKMVS LNLFRSCAPQ PHENQVLEEE EPLMDAAWAH VQIVYELLLR FVASPKLAKR YIDHSFVLRI LDIFDSDDLR EREYLKTVLH RMYGKFMVHH
201: PFIRKSINYH L

Best Arabidopsis Sequence Match ( AT3G26020.1 )
(BLAST)

001: MWKQILSKLP NKKSSKHEHR GREHGGHSSS SSHTSGASTS KSTDNGAAKS HAKNASPAGK SAASDSGFKD GNLKSSGNNN NNNNNGVFTP YEALPSFKDV
101: PNTEKQNLFI KKLNLCRVVF DFTDPTKNIK EKDIKRQTLL ELVDYVNSPN GKFSEVGIQE VVRMVSANIF RTLNPQPREN KVIDALDLEE EEPSMDLAWP
201: HLQLVYELFL RFVASPETDT KLAKRYIDQS FVLRLLDLFD SEDPRERDCL KTILHRIYGK FMVHRPFIRK SINNIFYRFV FETEKHNGIA EFLEILGSII
301: NGFALPLKDE HKVFLVRVLI PLHKPKCLQM YHQQLSYCIT QFVEKDCKLA DTVIRGLLKY WPVTNSSKEV MFLNELEEVL EATQPPEFQR CMVPLFRQIA
401: RCLNSLHFQV AERALFLWNN NHIENLIMQN RKVILPIIFP ALERNAQKHW NQAVHSLTLN VRKIFHDLDP ELFKECLAKF KEDESKAAET EAKREATWKR
501: LEELGVRKAS

Arabidopsis Description

Protein phosphatase 2A regulatory B subunit family protein [Source:UniProtKB/TrEMBL;Acc:F4JBC4]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.