Factsheet for PGSC0003DMT400008785

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc01g111790.1.1	Tomato	mitochondrion, plastid	95.09	87.56
VIT_03s0038g02850.t01	Wine grape	cytosol	71.01	61.88
KRH36100	Soybean	plastid	64.37	57.33
GSMUA_Achr3P00600_001	Banana	mitochondrion	51.11	41.77
Zm00001d006254_P001	Maize	cytosol	47.17	41.47
EER99281	Sorghum	mitochondrion	47.67	41.19
HORVU5Hr1G084630.1	Barley	cytosol	46.44	40.47
TraesCS5D01G341500.1	Wheat	cytosol	45.7	39.74
TraesCS5B01G335800.1	Wheat	cytosol	45.7	39.49
TraesCS5A01G336800.1	Wheat	cytosol	45.21	39.4
Os09t0542700-00	Rice	cytosol	45.95	38.8
PGSC0003DMT400060086	Potato	cytosol, plastid	42.01	36.0
PGSC0003DMT400072691	Potato	cytosol, mitochondrion	41.52	34.35
PGSC0003DMT400067211	Potato	cytosol, plastid	41.03	33.53
PGSC0003DMT400052115	Potato	plastid	42.51	33.27
PGSC0003DMT400045008	Potato	cytosol, plastid	40.54	32.87
PGSC0003DMT400017950	Potato	plastid	42.26	32.82
PGSC0003DMT400001856	Potato	cytosol, mitochondrion, plastid	42.26	31.56
PGSC0003DMT400002753	Potato	plastid	38.08	30.63
PGSC0003DMT400034814	Potato	cytosol	14.25	27.49

Protein Annotations

Gene3D:1.25.10.10	MapMan:18.4.24.1.2.3	InterPro:ARM-like	InterPro:ARM-type_fold	GO:GO:0000159	GO:GO:0003674
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0006464	GO:GO:0007154
GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0019538	GO:GO:0019888
GO:GO:0030234	GO:GO:0043666	GO:GO:0050790	InterPro:IPR011989	UniProt:M0ZV35	PFAM:PF01603
EnsemblPlantsGene:PGSC0003DMG400003416	PGSC:PGSC0003DMG400003416	EnsemblPlants:PGSC0003DMT400008785	InterPro:PP2A_B56	PANTHER:PTHR10257	PANTHER:PTHR10257:SF28
SUPFAM:SSF48371	UniParc:UPI0002964CE4	SEG:seg	:	:	:

Description

Serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' beta isoform [Source:PGSC_GENE;Acc:PGSC0003DMG400003416]

Coordinates

chr1:+:88171084..88172578

Molecular Weight (calculated)

47521.8 Da

IEP (calculated)

5.815

GRAVY (calculated)

-0.144

Length

407 amino acids

Sequence
(BLAST)

001: MTSSLDSETE ELLSLISYCS FAYTFTDPQE SPSQQDLKRL KLIQLLSIIK TLIKPLDDQV LSPLFIMLSS NLFRPLPPPI HSVVSVLPDD DDLVSNPTPS
101: WPHLQIVYDL FLRIVSRTSV ESLRIYIDHA FLLSLLALFQ SEDQRERDNL KNVFHRIYSK LTFYRPFMRK TMHDVFLHYV FETDQRHPGI GELLEIWGTI
201: INGFSVPLKE EHKFFLNRVL VPLHKPKGMQ VYHRQLAYCV SQFVQKEPEL GEVVIRGILK YWPITNCQKE VLFIGELEEL VETVDPQLYK ELALPLCTKI
301: TKCLNSWNSQ VAERALYVWN NEQFWKMASQ AMEEVFPVLV EGMEKNLQGH WSKSVRQLTE NVKGMLEALA PFLYSKCLLQ LEIQEAGERI EEMRRKEIWE
401: KIENAAM

Best Arabidopsis Sequence Match ( AT3G09880.1 )
(BLAST)

001: MFKKIMKGGH RKPSKSEANE PSSYGIGLPD NRSGPGSNVV VSHASRGALV NSSPSPVTAT PPPPPLGSVE PLPLFRDVPV SERQTLFLRK LQNCCFLFDF
101: TDTIKNARDK EIKRQTLLEL VDFIQSGSSK ISESCQEEMI KMISVNIFRS LPPASHENTG QEPADPEEEE PYLEPSWPHL QLVYELLLRY VVSTDTDTKV
201: AKRYIDHSFV LKLLDLFDSE DPREREYLKT ILHRIYGKFM VHRPFIRKAI NNIFYRFIYE TERHSGIGEL LEILGSIING FALPMKEEHK LFLIRVLIPL
301: HKPKPIVVYH QQLSYCIVQF VEKDYKLADT VIRGLLKYWP VTNCSKENLF LGELEEVLEA TQPVEFQRCM VPLFQQIGRC LTSSHFQVAE RALFLWNNEH
401: IVGLIAQNRS VILPIIYPTL EKNIQSHWNQ AVHGLTTNIK KMFMEMDPEL FEECQRQYEE KQAKSKEVEE QRQYTWKRLA EAAAERDGGG GEEDHMITS

Arabidopsis Description

B'BETASerine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' beta isoform [Source:UniProtKB/Swiss-Prot;Acc:O04376]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.