Factsheet for TraesCS5B01G335800.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

mitochondrion 2
cytosol 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G341500.1	Wheat	cytosol	96.18	96.79
TraesCS5A01G336800.1	Wheat	cytosol	94.9	95.72
HORVU5Hr1G084630.1	Barley	cytosol	93.42	94.22
Zm00001d006254_P001	Maize	cytosol	70.49	71.71
EER99281	Sorghum	mitochondrion	69.0	69.0
Os09t0542700-00	Rice	cytosol	68.15	66.6
PGSC0003DMT400008785	Potato	cytosol	39.49	45.7
VIT_03s0038g02850.t01	Wine grape	cytosol	45.01	45.4
KRH36100	Soybean	plastid	42.89	44.2
GSMUA_Achr3P00600_001	Banana	mitochondrion	46.07	43.57
Solyc01g111790.1.1	Tomato	mitochondrion, plastid	40.76	43.44
TraesCS1B01G398300.1	Wheat	cytosol	8.07	35.51
TraesCS1B01G408600.1	Wheat	plastid	35.03	33.0
TraesCS3B01G140800.1	Wheat	plastid	33.55	32.51
TraesCS2B01G362000.2	Wheat	cytosol, mitochondrion	33.97	31.81
TraesCS7B01G214300.2	Wheat	nucleus	34.82	31.72
TraesCS1B01G138000.1	Wheat	cytosol, mitochondrion	32.7	31.69
TraesCS5B01G533000.1	Wheat	plastid	34.18	31.38
TraesCS4B01G026300.1	Wheat	mitochondrion	34.18	31.2

Protein Annotations

Gene3D:1.25.10.10	MapMan:18.4.24.1.2.3	InterPro:ARM-like	InterPro:ARM-type_fold	GO:GO:0000159	GO:GO:0003674
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0007154	GO:GO:0007165
GO:GO:0008150	GO:GO:0009987	GO:GO:0019888	GO:GO:0030234	InterPro:IPR011989	PFAM:PF01603
InterPro:PP2A_B56	PANTHER:PTHR10257	PANTHER:PTHR10257:SF28	SUPFAM:SSF48371	EnsemblPlantsGene:TraesCS5B01G335800	EnsemblPlants:TraesCS5B01G335800.1
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr5B:-:518960107..518962363

Molecular Weight (calculated)

51534.0 Da

IEP (calculated)

6.108

GRAVY (calculated)

0.004

Length

471 amino acids

Sequence
(BLAST)

001: MGAEVEVVSR VAPPRAPGKK RTSTTLLHLL QLDNPDGVFV FAAAAAANKL PPPEPEPEAE SLIDKIASCC RVFAFADDDA AERADERDAK LERLEEVLAA
101: VRSSGKNQPP GLDHLVMVAL VKMFAANLFR TMPPPATCPS VLAEAADEEA PAASLLPSWP HLQAVYDVLL AVIAAADAKA LRNHIDRPFL TSLLALFASE
201: DPRERDRLKT AYHQLYAKLT PERAFMRRSM AATLLASVHE CGGGVAELLE ICGSIINGFA VPLKEEHRGF LLRVLLPLHR ARWLHAYHRQ LVYCVLQFVH
301: KEPVLAGAVV EGILRRWPVT NCQKEVLLID ELEEIVDALD QRQFDALAAP ICSRIARCAT SCSSQVAERA LYVWNNERFL EMASAGGAME RILPPFVASV
401: EDNLERHWSK CVQQVTASVK ALLLQVAPDL YDRCSADLAA SRAEADARAA ARDARWRRLE AAADANGLSG S

Best Arabidopsis Sequence Match ( AT1G13460.1 )
(BLAST)

001: MWKQILSKLP KKSSSKNHSS SSSSTSKSSD NGASKSGNSQ TQNAPPVKPS ADSGFKEGNL KGNGNGFTPY EALPGFKDVP NAEKQNLFVR KLSLCCVVFD
101: FSDPTKNVKE KDIKRQTLLE LVDYVASPNG KFSETVIQEV VRMVSVNIFR TLNPQPRENK VIDALDLEEE EPSMDPTWPH LQLVYEILLR LIASPETDTK
201: LAKKYIDQSF VSRLLDLFDS EDPRERDCLK TVLHRIYGKF MVHRPFIRKS INNIFYRFVF ETEKHNGIAE FLEILGSIIN GFALPLKDEH KVFLVRALVP
301: LHKPKSLQMY HQQLSYCITQ FVEKDCKLAD TVIRGLLKSW PVTNSSKEVM FLNELEEVLE ATQPPEFQRC MVPLFRQVAR CLNSLHFQVA ERALFLWNND
401: HIENLIMQNR KVILPIIFPA LERNTQKHWN QAVHSLTLNV QKIFNDIDAE LFKDCLAKFR EDESKEAEIG AKREATWKRL EEIGNQKQKS SL

Arabidopsis Description

B'THETASerine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' theta isoform [Source:UniProtKB/Swiss-Prot;Acc:Q8LF36]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.