Factsheet for Os09t0542700-00

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
mitochondrion 1
cytosol 2
plastid 3
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER99281	Sorghum	mitochondrion	72.61	74.31
Zm00001d006254_P001	Maize	cytosol	70.33	73.22
HORVU5Hr1G084630.1	Barley	cytosol	66.81	68.95
TraesCS5D01G341500.1	Wheat	cytosol	66.81	68.8
TraesCS5A01G336800.1	Wheat	cytosol	66.39	68.52
TraesCS5B01G335800.1	Wheat	cytosol	66.6	68.15
PGSC0003DMT400008785	Potato	cytosol	38.8	45.95
VIT_03s0038g02850.t01	Wine grape	cytosol	42.74	44.11
Solyc01g111790.1.1	Tomato	mitochondrion, plastid	39.63	43.21
KRH36100	Soybean	plastid	40.87	43.11
GSMUA_Achr3P00600_001	Banana	mitochondrion	43.57	42.17
Os08t0122000-01	Rice	plasma membrane	34.65	32.36
Os01t0178400-01	Rice	cytosol	13.69	32.2
Os05t0178400-01	Rice	plasma membrane	32.57	31.98
Os04t0485100-01	Rice	plasma membrane	33.2	31.43
Os03t0844500-01	Rice	cytosol	33.2	30.95
Os03t0681800-00	Rice	plasma membrane	34.02	30.65
Os05t0555100-01	Rice	plastid	28.22	30.29
Os07t0274800-02	Rice	extracellular, plasma membrane	31.54	29.4

Protein Annotations

Gene3D:1.25.10.10	MapMan:18.4.24.1.2.3	EntrezGene:4347742	InterPro:ARM-like	InterPro:ARM-type_fold	ProteinID:BAC79198.1
ProteinID:BAD46600.1	ProteinID:BAT09217.1	GO:GO:0000159	GO:GO:0003674	GO:GO:0005102	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0006464	GO:GO:0007154
GO:GO:0007165	GO:GO:0008083	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0010469
GO:GO:0016020	GO:GO:0019538	GO:GO:0019888	GO:GO:0030234	GO:GO:0043666	InterPro:IPR011989
EnsemblPlantsGene:Os09g0542700	EnsemblPlants:Os09t0542700-00	PFAM:PF01603	PIRSF:PIRSF028043	InterPro:PP2A_B56	PANTHER:PTHR10257
PANTHER:PTHR10257:SF28	UniProt:Q7XJ10	SUPFAM:SSF48371	UniParc:UPI00001B226D	RefSeq:XP_015611064.1	SEG:seg

Description

Protein phosphatase 2A, regulatory B subunit, B56 family protein. (Os09t0542700-00)

Coordinates

chr9:-:21375813..21378542

Molecular Weight (calculated)

52653.6 Da

IEP (calculated)

7.386

GRAVY (calculated)

0.003

Length

482 amino acids

Sequence
(BLAST)

001: MGAAAAEEAV VVVRGAPPPP SSGKRRSTTL LHLFQLEKPD VVVGAMLLPP PSPEPEEDRL ITKIESCSRV FTFVDGGGAA GGESGEERDA KTEALGEVLA
101: AVRASGKRKQ GLDHRVMVAL VKMVAANLFR AMPPSAYPSS LPPPSDVLDD EVPVMVLLPS WPHLHLVYDV LTAAVAAADA RALRNHVDRS FLAGLVTLFA
201: SEDPRERDRL KTAYHLLYSK LTGERAFMRR TMAAALLRFV YDASPAEAER HCGVGELLEV CGSIINGFAV PLKEEHRAFM ARVLLPLHRT RWVHTYHRQL
301: AYCVLQFVHK DPGLAGAAVR DILRHWPATN CQKEVLLIDE LEEIVEILDQ HHFDKLVVPV CSRIARCVSS CSSQVAERAL YVWNNERFVA MACAAGPAAM
401: EERILPAFVA SMEANLERHW SRCVQQVTAS VRALLDRVAP GAYARCAAGL AARLAEADAD AAARRARWRR LELAADAGAD AK

Best Arabidopsis Sequence Match ( AT3G26020.1 )
(BLAST)

001: MWKQILSKLP NKKSSKHEHR GREHGGHSSS SSHTSGASTS KSTDNGAAKS HAKNASPAGK SAASDSGFKD GNLKSSGNNN NNNNNGVFTP YEALPSFKDV
101: PNTEKQNLFI KKLNLCRVVF DFTDPTKNIK EKDIKRQTLL ELVDYVNSPN GKFSEVGIQE VVRMVSANIF RTLNPQPREN KVIDALDLEE EEPSMDLAWP
201: HLQLVYELFL RFVASPETDT KLAKRYIDQS FVLRLLDLFD SEDPRERDCL KTILHRIYGK FMVHRPFIRK SINNIFYRFV FETEKHNGIA EFLEILGSII
301: NGFALPLKDE HKVFLVRVLI PLHKPKCLQM YHQQLSYCIT QFVEKDCKLA DTVIRGLLKY WPVTNSSKEV MFLNELEEVL EATQPPEFQR CMVPLFRQIA
401: RCLNSLHFQV AERALFLWNN NHIENLIMQN RKVILPIIFP ALERNAQKHW NQAVHSLTLN VRKIFHDLDP ELFKECLAKF KEDESKAAET EAKREATWKR
501: LEELGVRKAS

Arabidopsis Description

Protein phosphatase 2A regulatory B subunit family protein [Source:UniProtKB/TrEMBL;Acc:F4JBC4]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.